Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00447 ATGAGAATTAATTCAGATTCAAATCATGCAAAAGTTAAGCAGAAGGAAAAACTAGAGCATAATTCTTCTTCATCTGTTGTTTCACTTTCACCACCACATGAGAAAAATGGAAGAAGACAAGGCACACTCAAGTTGAAGAAGAAGAAGATTGGTGTAGAAGTTCATGAGAGAAAATTGTTCaatgataataataataataagaaGGGTTTATTGAAGATTGATGAGTATGATAGAGACAAGGAATATGATAACATAAGGAGAAGATTTGAGAGGAAAGCACAACAAGTTTTGGAAGAACAACTCTTGAAACTTGAAAGAGAAGTAAAAGAGATTgaagaacaagaagaagaagaagaagaagaagaTGTTCTGTTTCAATTTGAATCACCAAGAACAATTTGTACACCAAGAACACATTCTTTTGCTACTTATTATGCAGGGTTGAAGAATCCTTCTAGTTTAAGAAGTGTCAAAGAAAATGGTTATGTGAAAAGTGAAAGGCTGTTTCAGAAGAAACTTTGTTCTGAGAAGTTGAATTTGAAGGAGTTGAAGGTAAAAAGTGAGAAACAGAAAAGACCATTGAATTTTAACAGAGAAATTCAAAGGAGGAAACCAAAGAAAGTCTCAAGGGTCAAAATATATTCACCAAGGATGGTTTCAAAGATTGAAATTTGCAGAATAAAAGCTCTAGAAGAAATGAGGAACAAAGCAAAACTGAAAATGAAGAAATTAGAAAGGGAGGAAATTGGTAAACCAGAATTAGATAGTTTTGCTGTGATAAAATGTTCATTAAATCCAAAACAGGATTTCAGAGATTCAATGATTGAAATGATTGAAGAGAAAGGGATTAAGAAACCAGAAGAAATGGAAGAGCTTTTGGCATGTTATTTGACTTTGAATGCTGATGAGTATCATGACCTTATAATCAAAGTATTCAGACAGGTATGGTTTGAAATGAAGCAACATGGTTTTGGTTTCAATTCACAAATTCATTGGGGTTACTATCAATAA 1011 0.3116 MRINSDSNHAKVKQKEKLEHNSSSSVVSLSPPHEKNGRRQGTLKLKKKKIGVEVHERKLFNDNNNNKKGLLKIDEYDRDKEYDNIRRRFERKAQQVLEEQLLKLEREVKEIEEQEEEEEEEDVLFQFESPRTICTPRTHSFATYYAGLKNPSSLRSVKENGYVKSERLFQKKLCSEKLNLKELKVKSEKQKRPLNFNREIQRRKPKKVSRVKIYSPRMVSKIEICRIKALEEMRNKAKLKMKKLEREEIGKPELDSFAVIKCSLNPKQDFRDSMIEMIEEKGIKKPEEMEELLACYLTLNADEYHDLIIKVFRQVWFEMKQHGFGFNSQIHWGYYQ 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00447 336 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 258 319 IPR006458 -
Car01g00447 336 Pfam Transcriptional repressor, ovate 263 319 IPR006458 -
Car01g00447 336 MobiDBLite consensus disorder prediction 1 20 - -
Car01g00447 336 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 13 329 IPR038933 GO:0045892
Car01g00447 336 PANTHER TRANSCRIPTION REPRESSOR OFP4 13 329 - -
Car01g00447 336 Coils Coil 227 247 - -
Car01g00447 336 MobiDBLite consensus disorder prediction 1 44 - -
Car01g00447 336 Coils Coil 87 124 - -
Car01g00447 336 ProSiteProfiles OVATE domain profile. 259 318 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00447 Car-Chr1 3516313 3517508 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Car01g00447 Ovate 1.2e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00447 - - cam:101515364 625.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g00447 01 3516313 3517508 Car01g00447 01 3516313 3517508 ECH
Car06g00958 06 9358103 9359219 Car01g00447 01 3516313 3517508 PCT