Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00441 ATGGAAAGATCATCCATCTCTTCTTCCACTAAAAGGCGAGGTATAAAGAAAAGGGTAGTAGAAATTCCAATGAAGGACGTGGAAGGGACTAACACTCCACCGTCCGATTCATGGGCATGGAGAAAGTACGGTCAGAAACCAATCAAAGGTTCCCCTTATCCAAGGGGATACTATAGGTGTAGCAGTTCAAAGAGTTGTCCGGCGAGAAAACAAGTGGAAAGGAACCATGTGGACCCCACTGTGCTCCTTGTAACATACTCCTCCGATCACAACCACGCCGTGCCGCTTCCTAGAAACCACCGCAACAATAACAACGAATCTGCTAAATCAAACAAGGATTCCGAATCGGAACACGAACCCGAACCAGAGGAGAGATTTACGGATCTTGGAGAGGAATCTCTGATCGCCGTCGCGGATGAGTTAGGAGGATGGTTGGGAGAAGTGGAAGCGATCGCGTCGCCGGCGGTTCTGGAGTGTCCGATTTTCTCAGATCAGGAATTGTCAATGTTGGGGGAAGAGGAGGAGTCGCTGTTCGCGGATCTCGGAGAGTTGCCAGAGTGCTCGGCGGTGTTCTGGAGAGGGAGGAGGAGTATTGCCGGCGAAGTGAGTGTGGGACCACTAGTTGAAGCTAATTGCTCCTTGTGA 645 0.5054 MERSSISSSTKRRGIKKRVVEIPMKDVEGTNTPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKSCPARKQVERNHVDPTVLLVTYSSDHNHAVPLPRNHRNNNNESAKSNKDSESEHEPEPEERFTDLGEESLIAVADELGGWLGEVEAIASPAVLECPIFSDQELSMLGEEEESLFADLGELPECSAVFWRGRRSIAGEVSVGPLVEANCSL 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00441 214 MobiDBLite consensus disorder prediction 1 24 - -
Car01g00441 214 MobiDBLite consensus disorder prediction 105 130 - -
Car01g00441 214 Pfam WRKY DNA -binding domain 36 92 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car01g00441 214 SUPERFAMILY WRKY DNA-binding domain 31 95 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car01g00441 214 SMART WRKY_cls 34 94 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car01g00441 214 ProSiteProfiles WRKY domain profile. 35 95 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car01g00441 214 MobiDBLite consensus disorder prediction 91 130 - -
Car01g00441 214 PANTHER OS01G0750100 PROTEIN 4 198 - -
Car01g00441 214 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 4 198 IPR044810 GO:0003700
Car01g00441 214 Gene3D WRKY domain 22 96 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car01g00441 214 MobiDBLite consensus disorder prediction 1 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00441 Car-Chr1 3455053 3456898 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00441 4 200 WRKY Transcription Factor Family AT1G29280 50.228 2.89e-62 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Car01g00441 WRKY 2.5e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00441 - - gmx:100127392 227.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g00441 01 3455053 3456898 Car01g00441 01 3455053 3456898 ECH