Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00437 ATGAAGAGTTGTGATGAATGGAAACCTTTTATGATAATGATAGCAATTGATTTTTCTTTTGCTGCTGTGAATATTCTTCTCAAGAAAGTCCTTGATGAAGGAATGAACCATTTGGTTTTTATCACATACCGTCTCTCAATTGCTACCATATTTGTAGCTCCAATTGGTTACTTTAGGGAAAGAAATAGCAGACCAAGGCTCACACTTAGAATTTTATGCTACCTTTTCTTAAGTGCCATTGTTGGAGCATCAGTGACTCAATACTTTTTCCTTCTGGGGATCGAAAATACTTCTGCTACATTTGCTTGTGCTTTTGTCAACATGGTGCCTGTGGTCACTTTCCTATTGGCATTGCCATTTGGATTAGAGACTGTGGACATCAAATGCAATAGTGGTAGAGCCAAAATTGTTGGTACATTGGTCTGTATAGTTGGAGCATTGTTGTTGACACTTTACAAAGGAAAGGGTCTGTTTAATTTTTCTCAGCATGATCAGTCTTCATCAGTGAAGCTAGCATCTACTAGGACACCAGAGAAATGGAGTATTGGTGTGATAGCTTTGATTTTGGGAACCCTGTTTTGGTCTTTTTGGTTCATTTTACAATCTAAAATAAGCAAAACATATCCATGTCAATATTCTAGCACAGCAATCATGAGTTTCTTTGGAGCCATTCAATCAGCTGTCATTTGCTTGTTCATTGACCACAACTTGTCAATTTGGGTTCTCAGAGGAAAGATACAAATAATTGCTATTTTGTATGCTGGAATAATTGGATCAGGTTTGTGTTTTGTGGGGATGTCATGGTGTGTAAAGAAGAGGGGTCCAGTCTTTACAGCAGCATTCAGCCCTTTTGTTCAGATAATGGCAGCTATGATTGATATCCCTGTCTTGCATGAGCAGCTCTATCTTGGAAATGTGATGGGATCCATCTTGGTGATGATTGGACTATACATTCTTCTATGGGGGAAGAGCAAAGAGATGAAGAATCGTTTGAATAAGTTAGTTGAGGAAGCTGAAGAAACCAAGGAACAAGAACCACAACCTCAAATACAACACTTAAATGTGTCTTGTGATTCACGGTGTCACTAA 1089 0.3838 MKSCDEWKPFMIMIAIDFSFAAVNILLKKVLDEGMNHLVFITYRLSIATIFVAPIGYFRERNSRPRLTLRILCYLFLSAIVGASVTQYFFLLGIENTSATFACAFVNMVPVVTFLLALPFGLETVDIKCNSGRAKIVGTLVCIVGALLLTLYKGKGLFNFSQHDQSSSVKLASTRTPEKWSIGVIALILGTLFWSFWFILQSKISKTYPCQYSSTAIMSFFGAIQSAVICLFIDHNLSIWVLRGKIQIIAILYAGIIGSGLCFVGMSWCVKKRGPVFTAAFSPFVQIMAAMIDIPVLHEQLYLGNVMGSILVMIGLYILLWGKSKEMKNRLNKLVEEAEETKEQEPQPQIQHLNVSCDSRCH 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00437 362 Pfam EamA-like transporter family 12 150 IPR000620 GO:0016020|GO:0016021
Car01g00437 362 Pfam EamA-like transporter family 182 320 IPR000620 GO:0016020|GO:0016021
Car01g00437 362 PANTHER WAT1-RELATED PROTEIN 9 343 - -
Car01g00437 362 MobiDBLite consensus disorder prediction 347 362 - -
Car01g00437 362 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 154 - -
Car01g00437 362 PANTHER WAT1-RELATED PROTEIN 9 343 IPR030184 GO:0016021|GO:0022857
Car01g00437 362 MobiDBLite consensus disorder prediction 339 362 - -
Car01g00437 362 Coils Coil 324 344 - -
Car01g00437 362 SUPERFAMILY Multidrug resistance efflux transporter EmrE 244 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00437 Car-Chr1 3432123 3435608 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00437 7 254 Nodulin-like Gene Family AT3G30340 50.201 2.46e-89 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00437 - - gmx:100803670 598.971