Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00428 ATGAGCTTTTACCAAAAGCTCATAATCTTTCTTGTTTCCCACTTCTTGAACCAGTTTTATTGTTTCATGGAAGGTGTTAAAGTGGTTGCTTTGTTTGTTTCCTTTATGCTGTTGCATTTGGTGGCAATGATTGTTGTTGAGGGCACTGAAAGTCTTCTCTCTCCAAAGGGTGTTAACTATGAAGTGGCTGCTTTGATGTCCATGAAGAGTAAGATGAATGACGGGTTGCATGTTATGGATGGTTGGGATATTAATTCTGTTGACCCTTGTACTTGGTACATGGTTGCTTGTTCTGCTCAGGGTTATGTGATTTCTCTGGAAATGGCTAGTGCTGGATTATCTGGAACGATTTCCTCCGGAATTGGAAATTTGAGCCACCTCCAAACATTGTTATTGCAGAACAATCGGTTATCTGGTCCTATCCCGGCTGAGATAGGAAACCTGTTAGAGCTTCAAACCCTCGATCTTTCCGGTAACCAGCTTGTTGGGAACATTCCTAGTTCTTTGGGTTTTTTGACTCATCTTAGTTACTTGCGGCTTAGCAAAAATAAACTGTCTGGACAGATCCCTCAACTTGTTGCTAATCTCACAGGACTTTCGTTCTTGGATTTGTCATTCAACAATCTCAGTGGTCCTACTCCAAAAATTTTAGCAAAAGGTTATAGTATTTCAGGAAACAACTTCCTCTGTACATCATCCTCACAAATTTGTATGGGTGCTTCGAAGCCAGTAAATGATACAGGGTCATCTCGGACAGTCAGCAGTCATCGCCATACGGTGCTTTCGGTTGTTATTGGTTTTAGTTGTTCATTTGTAATTTCAGTGGTGCTGCTCGTCTATTGGTTGCACTGGTACAAATCACGCATCCTCTATTCATCCTACGTGGAGCAAGATTGTGAATTTGGTATTGGTCATTTGAAGAGGTTCTCCATCCGTGAATTGCAAATTGCTACTGGAAATTTCAGTTCAAAAAATATTATAGGACAAGGTGGTTTTGGTGTTGTATACAAAGGATGCCTTGCAAACAAAATGTTGGTGGCAGTTAAGAGGCTGAAAGATCCCAATTATACCGGAGAAATGCAGTTTCAAACCGAGGTTGAGATGATTGGCTTGGCTGTACATCGTAACCTCTTGCGTCTTTATGGATTTTGTATGACACCAGATGAAAGGTTACTCATTTATCCTTTCATGCCCAATGGCAGCGTTGCTGATCGCTTGAGAGAGACTTTCCGTGGAAAGCCGTGTTTGGATTGGAATAGGCGAATGCACATTGCTGTTGGGGCTGCACGTGGGCTTCTGTATTTGCACGAACAATGCAATCCTAAAATAATCCACAGGGATGTTAAGGCTGCGAACATTTTGTTAGATGAAAGTTTTGAAGCTGTGGTGGGAGATTTTGGTCTTGCTAAGCTCTTAGATCAAAGGGATTCACATGTAACTACAGCAGTACGGGGTACCGTAGGACACATTGCCCCGGAATATCTTTCGACCGGACAGTCTTCCGAAAAAACAGATGTTTTTGGATTTGGCATATTACTTTTGGAGCTCATTACAGGACAAAAAGCACTGGATGCTGGAAACGTTCAGGTCCAAAAGGGAATGATTCTTGATTGGGCTAGAACTTTATTTGAGGAAAAGCGGCTGGAAGTGTTAGTTGATAGGGATCTAAAGGGATGTTTCGATCCGGTAGAGTTAGAAAAAGCAGTGGAGTTATCTTTGCAATGTACTCAATCTCTTCCTAGTTTGAGGCCAAAAATGTCAGAAGTTTTGAAGATTCTTGAAGGCCTTGTTGGTTTGTCATTGAGGCCAGAAGAGTCACAAGGAGGGGCTAACTTATATGATGAAAGGACTTGCAGTTTCTCTCAAAATTATAGTGATGTTCATGAACAACCTTCCTTTATTATTGAAGCCATTGAACTTTCTGGACCTAGGTGA 1935 0.4155 MSFYQKLIIFLVSHFLNQFYCFMEGVKVVALFVSFMLLHLVAMIVVEGTESLLSPKGVNYEVAALMSMKSKMNDGLHVMDGWDINSVDPCTWYMVACSAQGYVISLEMASAGLSGTISSGIGNLSHLQTLLLQNNRLSGPIPAEIGNLLELQTLDLSGNQLVGNIPSSLGFLTHLSYLRLSKNKLSGQIPQLVANLTGLSFLDLSFNNLSGPTPKILAKGYSISGNNFLCTSSSQICMGASKPVNDTGSSRTVSSHRHTVLSVVIGFSCSFVISVVLLVYWLHWYKSRILYSSYVEQDCEFGIGHLKRFSIRELQIATGNFSSKNIIGQGGFGVVYKGCLANKMLVAVKRLKDPNYTGEMQFQTEVEMIGLAVHRNLLRLYGFCMTPDERLLIYPFMPNGSVADRLRETFRGKPCLDWNRRMHIAVGAARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDQRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQKALDAGNVQVQKGMILDWARTLFEEKRLEVLVDRDLKGCFDPVELEKAVELSLQCTQSLPSLRPKMSEVLKILEGLVGLSLRPEESQGGANLYDERTCSFSQNYSDVHEQPSFIIEAIELSGPR 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00428 644 SUPERFAMILY L domain-like 60 230 - -
Car01g00428 644 Gene3D Transferase(Phosphotransferase) domain 1 397 597 - -
Car01g00428 644 Gene3D Ribonuclease Inhibitor 58 238 IPR032675 -
Car01g00428 644 ProSitePatterns Serine/Threonine protein kinases active-site signature. 443 455 IPR008271 GO:0004672|GO:0006468
Car01g00428 644 ProSitePatterns Protein kinases ATP-binding region signature. 327 349 IPR017441 GO:0005524
Car01g00428 644 Pfam Leucine rich repeat N-terminal domain 59 98 IPR013210 -
Car01g00428 644 Gene3D Phosphorylase Kinase; domain 1 291 396 - -
Car01g00428 644 Pfam Protein kinase domain 322 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g00428 644 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 35 644 - -
Car01g00428 644 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 35 644 - -
Car01g00428 644 ProSiteProfiles Protein kinase domain profile. 321 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g00428 644 SMART serkin_6 321 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g00428 644 SUPERFAMILY Protein kinase-like (PK-like) 304 594 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00428 Car-Chr1 3362128 3366801 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00428 66 644 Receptor kinase-like Gene Family AT5G45780 69.880 0.0 808
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Car01g00428 Pkinase 3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00428 - - ccaj:109812711 1113.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g00428 01 3362128 3366801 Car01g00428 01 3362128 3366801 ECH