Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00423 ATGGCGGACGTGCTTTCTCAAAAGGCAAAAACACCATCAAAGAAAGAAACATCGAGTCTTTTACTTGGTCGATTCGAAATTGGGAAGCTCCTTGGCCATGGAACCTTTGCGAAGGTTTACTACGCTAGAAACATCAAAACCGGTGAAGGTGTAGCTATAAAAGTAATCGACAAAGAGAAAATCCTAAAGGGTGGTTTGGTTGCACACATAAAACGCGAGATCTCAATTCTTCGCCGTGTTCGTCACCCTAACATCGTCCAACTGTTTGAGGTAATGGCTACAAAAACAAAGATCTATTTTGTAATGGAATATGTTCGTGGGGGTGAACTTTTCAATAAGGTTGCAAAGGGTAGATTGAAAGAAGAGGTTGCTAGAAAGTATTTTCAACAATTGATCTCAGCCGTTGGTTTTTGTCATGCTAGAGGGGTTTACCATAGAGATCTAAAGCCTGAAAATTTGTTGCTTGATGAGAATGGTAATTTAAAAGTATCTGATTTTGGTTTAAGTGCTGTTTCTGATCAAATTCGACAAGATGGTTTGTTTCATACTTTTTGTGGCACACCTGCTTATGTTGCTCCTGAGGTTTTGGCTAGGAAAGGTTATGATGGTGCTAAAGTTGATCTTTGGTCTTGTGGTGTTGTTTTGTTTGTTTTGATGGCTGGTTATTTACCTTTTCATGATCAAAATGTTATGGCAATGTATAAGAAGATTTATAAAGGCGAGTTTAGGTGTCCCAGGTGGTTTTCACCTGATTTGTCTAAACTTCTCATTAAGCTTCTTGATACAAAGCCTGAAACTAGGATTGCTATTCCTGAAATCATGGAGAATAGGTGGTTTAAAAAAGGCTTCAAACAAATTAAGTTTTATGTTGAGGATGATAGGCTTTGtagtgttgatgataataataattttattgacaatgaagatgataCAGCTTCTATAGCATCTTTTTCTGATTACTCGGTTTCGGAATCGGATTCTGAGTTTGAGACTAGAAGGAGGAATGCTCCTTTGCCTAGACCTGCTAGTTTGAATGCTTTTGACATTATTTCATTCTCACCTGGTTTTGATCTTTCTGGACTTTTTGAGGAAAAAGGCGACGAGAATAGGTTTGTGACAGCTGCGCCGGTTTCCAAGATCATCAACAAACTGGAAGAGATAGCTCAGTTGGTTAGTTTTTCTGTGAGGAAGAAGGATTGTAGGGTGAGTTTGGAAGGTACAAGAGAAGGTGTGACAGGACCATTGACTATTGCTGCTGAGATATTTGAACTTACACCTTCTTTGGTTGTTGTTGAGGTGAAGAAAAAAGGAGGGGACAGAGCTGAATACGAGAGGTTCTGTAACGACGAATTGAAACCTGGATTGCAGAATTTGATGGCAGAGGAATCAGCAACTTCTTCAGCATTGTCACCACGTACCGAACCGACTTTACTACGTGTGCTTTCTGAACCAGTTCATCACAGCATAACTTCGGATATTGATGAATCTCCACATTATTTACCTGAAGAGTGA 1512 0.3862 MADVLSQKAKTPSKKETSSLLLGRFEIGKLLGHGTFAKVYYARNIKTGEGVAIKVIDKEKILKGGLVAHIKREISILRRVRHPNIVQLFEVMATKTKIYFVMEYVRGGELFNKVAKGRLKEEVARKYFQQLISAVGFCHARGVYHRDLKPENLLLDENGNLKVSDFGLSAVSDQIRQDGLFHTFCGTPAYVAPEVLARKGYDGAKVDLWSCGVVLFVLMAGYLPFHDQNVMAMYKKIYKGEFRCPRWFSPDLSKLLIKLLDTKPETRIAIPEIMENRWFKKGFKQIKFYVEDDRLCSVDDNNNFIDNEDDTASIASFSDYSVSESDSEFETRRRNAPLPRPASLNAFDIISFSPGFDLSGLFEEKGDENRFVTAAPVSKIINKLEEIAQLVSFSVRKKDCRVSLEGTREGVTGPLTIAAEIFELTPSLVVVEVKKKGGDRAEYERFCNDELKPGLQNLMAEESATSSALSPRTEPTLLRVLSEPVHHSITSDIDESPHYLPEE 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00423 503 ProSitePatterns Protein kinases ATP-binding region signature. 31 54 IPR017441 GO:0005524
Car01g00423 503 ProSiteProfiles Protein kinase domain profile. 25 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g00423 503 ProSiteProfiles NAF domain profile. 339 363 IPR018451 GO:0007165
Car01g00423 503 Gene3D Kinase associated domain 1, KA1 339 460 - -
Car01g00423 503 ProSitePatterns Serine/Threonine protein kinases active-site signature. 143 155 IPR008271 GO:0004672|GO:0006468
Car01g00423 503 PANTHER - 6 468 - -
Car01g00423 503 Pfam NAF domain 341 397 IPR004041 GO:0007165
Car01g00423 503 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 19 6 468 - -
Car01g00423 503 Gene3D Transferase(Phosphotransferase) domain 1 15 335 - -
Car01g00423 503 Pfam Protein kinase domain 25 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g00423 503 SUPERFAMILY Protein kinase-like (PK-like) 21 280 IPR011009 -
Car01g00423 503 CDD STKc_SnRK3 24 278 - -
Car01g00423 503 SMART serkin_6 25 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g00423 503 CDD CIPK_C 345 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00423 Car-Chr1 3314957 3317498 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00423 1 462 CBL-interacting serine-threonine protein kinases AT4G18700 78.879 0.0 757
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Car01g00423 Pkinase 1e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00423 - - gmx:100790133 872.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g00423 01 3314957 3317498 Car01g00423 01 3314957 3317498 ECH