Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00422 ATGGATAAGAAAGCAACAATTCTAATGCAAAAATATGAAATAGGACGCATGCTTGGCCAAGGAAACTTCGCCAAAGTGTACCATGCAAGAAACTTGAAAACAGGACAAAGTGTTGCCATCAAGGTGTTTAACAAAGAAATGATCATGAGAGTAGGTTTGAAGGAACAAGTAAAGCGCGAAATCTCGGGGATGCGTCTCGTTAGACATCCCAACATTGTGGAACTCTATGAGGTCATGGCAAGTAAAACAAAGATATATTTTGCAATGGAATACGTGAAAGGTGGCGAACTTTTCGACAAAGTGTCGAAAGGTAAGCTAAGGGAAGATGTGGCTAGGAAATATTTTCAACAGCTTATTGAAGCTGTTAATCATTGTCACAAGAGAGGGGTTTATCATCGTGACCTTAAACTAGAAAATCTTCTCCTTGATGAAAATGGTGACCTCAAAGTTTCAGATTTTGGTCTAAGTGCATTATTGGAATCAAAGAAAAAAGATGGTCTTTTACACACAACATGTGGTACTCCAGCTTATGTAGCACCTGAAGTTATAAGGAAAAAAGGTTATGATGGAGATAAAGCTGATATTTGGTCTTGTGGAGTTGTTCTCTATGTTCTATTAGCTGGTTTTCTTCCTTTCAATGAGAAAAATCTAATGGAAATGTATAAGAAGATTACAAAAGCTGATTTCAAGTTTCCGCAATGGTTTCGTTCCGATGTTAAAAGGCTTCTCTATAGAATTCTTGATCCTAATCCAAGAACAAGAATTAGTATTGACAAAATCATGCAAAATAGTTGGTTTTTAAAAGGTTATAACCAAATTGAAGCACCTAAATTACCGCCTTTATCGCCTACACGCGGCGATATCTGGGATGTTCATAATGTATTTGATTTTGATTTATTATCATCACCATCAAGTAGTTCATATGGAACTCCAAGTCCAATGTGTGTTATTAACGATGATGAATGCAACATGAAGCCTTATTGTTTCAATGCATTTGATCTAATATCACTCTCTTCAGGATTCAATCTTTCAGGCTTGTTTGAGAAAGATATGAATGAAAGAGAGAATGCAAGATTTGCTACAAAAAGACCACCTTCAATAGTTGTGTCAAAACTTGAAGAGATAGCACAAATAGATGGTAGATTTAAGGTTATGAAGAAAAATGGGATCATTAGATTGGAAGGAACTGAGACAGGGCTAAATGATCAACTAAGTATAGATACAGAAATTTTTGAAGTTACATCATCATTTTATATTGTTGAGATCAATAAAATTGCTGGTGAGACATTGGAATATAGGAAATTCTGGGATCATTATTTAAAGCCTTCCCTAAATGAAATAGTTTGGGTTTGGCAAGGATAA 1362 0.3532 MDKKATILMQKYEIGRMLGQGNFAKVYHARNLKTGQSVAIKVFNKEMIMRVGLKEQVKREISGMRLVRHPNIVELYEVMASKTKIYFAMEYVKGGELFDKVSKGKLREDVARKYFQQLIEAVNHCHKRGVYHRDLKLENLLLDENGDLKVSDFGLSALLESKKKDGLLHTTCGTPAYVAPEVIRKKGYDGDKADIWSCGVVLYVLLAGFLPFNEKNLMEMYKKITKADFKFPQWFRSDVKRLLYRILDPNPRTRISIDKIMQNSWFLKGYNQIEAPKLPPLSPTRGDIWDVHNVFDFDLLSSPSSSSYGTPSPMCVINDDECNMKPYCFNAFDLISLSSGFNLSGLFEKDMNERENARFATKRPPSIVVSKLEEIAQIDGRFKVMKKNGIIRLEGTETGLNDQLSIDTEIFEVTSSFYIVEINKIAGETLEYRKFWDHYLKPSLNEIVWVWQG 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00422 453 ProSiteProfiles NAF domain profile. 324 348 IPR018451 GO:0007165
Car01g00422 453 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g00422 453 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g00422 453 PANTHER - 2 453 - -
Car01g00422 453 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Car01g00422 453 Gene3D Kinase associated domain 1, KA1 323 450 - -
Car01g00422 453 SUPERFAMILY Protein kinase-like (PK-like) 8 305 IPR011009 -
Car01g00422 453 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Car01g00422 453 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 2 453 - -
Car01g00422 453 CDD CIPK_C 330 445 - -
Car01g00422 453 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g00422 453 Gene3D Transferase(Phosphotransferase) domain 1 2 287 - -
Car01g00422 453 Pfam NAF domain 327 386 IPR004041 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00422 Car-Chr1 3307874 3309772 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00422 1 453 CBL-interacting serine-threonine protein kinases AT5G45820 62.996 0.0 578
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Car01g00422 Pkinase 3.3e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00422 K07198 - gmx:100807927 662.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g00422 01 3307874 3309772 Car01g00422 01 3307874 3309772 ECH