Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00420 ATGAAGAACACAGTCGTTGAGAAGTTCTCTGAATTCTACCAAAAATGGATTTTTAAGCTTGAAGAGATTCTTCATCAACTTCTTCAAGTTTCCAAAACCGAAGAACAAGAGATACAATCACTAGTTTCAAAAGTCACAACCCATTTGAAAGAATACTACACTGTTAAATGGGGTGCAGCACATGAAGATGTTGTTATCTTTTTCACACCAACATGGCTTAGTCCTTTAGAAAATGCTCACCTTTGGGTAACTGGTTGGAAACCCTCAACAGTCTTTCGAATCCTCGACGGTTTAAACGCAGCGTTTGATATGACAGAGGAACAGAAGAAGAAGATTGATGAACTgagagtgagggtaaggattgaggaagagaaagtggagagagagatggagagaCAACAAGTGGCTATGGCGGATTTAAAGATGGTGGAGCTTGCGAAGCTTTCATGCAGAGCAAGGAAAGGTGATGCAAGAGTTGATGGGTTGGTTGGTGTTGCTTTGAAGGCTGTGTTTGGTGGTTTGGAAAAAGTTATGAAAACTTCTGATTGTGTTAGACTTAAGACACTTAAAGGGGTTTTGGATGTTCTTACTCCAATTCAGTGTGTGGAGTTTTTGGCTGCAAATATTGGTATACAGTTAAGGTTGAGGAAATTTGGAATGAAGAGAGATTTAGCAGCTGGATGCATATTAAATGAAGAAATTTGA 705 0.3589 MKNTVVEKFSEFYQKWIFKLEEILHQLLQVSKTEEQEIQSLVSKVTTHLKEYYTVKWGAAHEDVVIFFTPTWLSPLENAHLWVTGWKPSTVFRILDGLNAAFDMTEEQKKKIDELRVRVRIEEEKVEREMERQQVAMADLKMVELAKLSCRARKGDARVDGLVGVALKAVFGGLEKVMKTSDCVRLKTLKGVLDVLTPIQCVEFLAANIGIQLRLRKFGMKRDLAAGCILNEEI 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00420 234 PANTHER PROTEIN DOG1-LIKE 4 1 223 - -
Car01g00420 234 Coils Coil 105 143 - -
Car01g00420 234 Pfam Seed dormancy control 24 95 IPR025422 GO:0006351|GO:0043565
Car01g00420 234 ProSiteProfiles DOG1 domain profile. 6 225 IPR025422 GO:0006351|GO:0043565
Car01g00420 234 PANTHER - 1 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00420 Car-Chr1 3298192 3299347 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00420 9 218 bZIP Transcription Factor Family AT3G12250 26.415 1.74e-13 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00420 - - gmx:100808459 297.745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g00420 01 3298192 3299347 Car01g00420 01 3298192 3299347 ECH