Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00419 ATGGGAATGAGATATAACACATTTGGATTTTGGTTTATAATTTATAATATTTGCTTCATTTCTCTTTTGGGAATCCATCAGTGTTGGTCGCTTAATGATGAAGGATTGGCTTTGTTGGAGTTTAGGGCAAGAATAACATGTGATCCTCGTGTTGCTTTGGAAAATTGGAATCCAAATGATTGTGACCCCTGCAAGTGGTTTGGGGTGCACTGTATCGATGGTAGAGTGCAGATGCTGGACCTAAATGGGCTATCTTTAGAAGGGACATTGGCTCCTGAGCTTGGGAAACTTAGTCACTTAAAATATCTTGTGTTATGGAATAACAATTTTTCCGGTGCCATTCCTAAAGAACTTGGAGATCTAGCTGAGCTAGAGTTATTGGATTTAAGAGAGAATAACTTGTCAGGAAGCATTCCAGCAGAGATTAGTAGAATGTTATCACTAAAACACTTGTTGCTTTGTGACAACAAAATAGAAGAGAGTGATTCTCAAGATCAAGAAAAATTCAGATTTCCCTCTAAATCACTACTTGTTGATCATTGTTCATCACCTCTCACTACATTATTTTCCTGCATCAATAGAAAGTTTGGTCACGGTGTGTGGCATAGCAACTTCAAGCAATGGAACAAACCAGATTCACTGATTATTCCAATTAAAGTAGCACTTCTGAAATGCCTCAATGCCTTTTCACTGCCACTGTTCAAACAAGGCCATGAAGAAAAATTTGGCGACCTTCAACCTCGTGCTAATGAGGCAGAGATTACCATGAATGTGCCGAGCCTTATCAATTACGCACGTCGAAGGTTACTCGGTGAATCGAGTAACCTTGCAGCTGAACCTTATAGTGGTGGACCTATAACAGATTTCAGTTATGATCCAATTATCATTAGTAGTGGATCTATTCCAGCTGTTCCAGATGTAGATAAGAAACAAAATCAGTCACACTCACCTTTGCCTTCTCCTTCTGATTCTGCTTTTGATGGAAACCAAACAAATCAACAACATTCAGCTAATGGTGGTTCTGGAAAGTTGTGGAAATATATAATAATTATCATAGTTGTGGCTGTTTTGCTCATTGTCGTCGTAGTTCTTTCCATTTGGAGAAAAAGAGCAGCTAAAATAATTAAACCTTGGAAAACTGGTATAAGTGGACAGTTGCAAAGAGCTTTTATAACAGGGGTTCCTAAGTTGAATAGAGGAGAACTAGAGACAGCATGTGAGGATTTCAGCAATATTGTTATTAGATTTGAAGGATGCACTGTCTACAAAGGAACACTGTCTAGTGGAGTCGAAATCGCGGTTGTTTCTACTCTTATTGATTCCTCTCAAGAATGGTCTAAGAGCATGGAATTGAACTACAGGAAAAAGATTGCGACATTGTCCCGCATAAACCATAAGAACTTTGTTAATCTTATTGGATACTGTGAGGAAGAAGAACCATTCACAAGGATGTTAATATTTGAATATGCTCCAAATGGAATCCTATTTGAGCACATACATGTTAGAGAAGTTGAACGTCTTGATTGGAGAGAAAGGGTGAGGATTATAATGGGAATTGCATATTGTCTTCAGTACATGCACCATGATCTAAATCCACCAGTAGCTCATAGCAAAGTTGCTTCAAATATGATCATGTTGACTGATGATTATGCTGCCAAGCTTGCGGAGGTCACTTTTAGAAATATTGAAGCACCATCTAGGACATCTAGAGGGGATTCAAAGAAATCAGATTTGCGCCGTGCTGATCTTGATGACAATGTCTTTGACTTTGGAATATTGCTGCTAGAAATCATTTCTGGTAAATTGCCTCAATCGGAAGAACAGTGCAATCTTGTCAACTGGGCTACTGAGTGCTTAAACGACAAGAGAAGCATCAGCTATATGATTGATCCAAATCTGCAGTCTTTCAAGGACAATGAACTTGATGTAATTTGTGAAGTAATTCAAGATTGTATACAACCTGATTCAAAGTTAAGGCCTACAATGAGAGATATAACTTCAAAATTGAAGGAAGTTCTTAGTGTGACACCTGAGCAAGCTGTTCCAAGACTTTCTCCACTATGGTGGGCTGAATTGGAGATATTATCAGTGGAGACTACTTAA 2103 0.3847 MGMRYNTFGFWFIIYNICFISLLGIHQCWSLNDEGLALLEFRARITCDPRVALENWNPNDCDPCKWFGVHCIDGRVQMLDLNGLSLEGTLAPELGKLSHLKYLVLWNNNFSGAIPKELGDLAELELLDLRENNLSGSIPAEISRMLSLKHLLLCDNKIEESDSQDQEKFRFPSKSLLVDHCSSPLTTLFSCINRKFGHGVWHSNFKQWNKPDSLIIPIKVALLKCLNAFSLPLFKQGHEEKFGDLQPRANEAEITMNVPSLINYARRRLLGESSNLAAEPYSGGPITDFSYDPIIISSGSIPAVPDVDKKQNQSHSPLPSPSDSAFDGNQTNQQHSANGGSGKLWKYIIIIIVVAVLLIVVVVLSIWRKRAAKIIKPWKTGISGQLQRAFITGVPKLNRGELETACEDFSNIVIRFEGCTVYKGTLSSGVEIAVVSTLIDSSQEWSKSMELNYRKKIATLSRINHKNFVNLIGYCEEEEPFTRMLIFEYAPNGILFEHIHVREVERLDWRERVRIIMGIAYCLQYMHHDLNPPVAHSKVASNMIMLTDDYAAKLAEVTFRNIEAPSRTSRGDSKKSDLRRADLDDNVFDFGILLLEIISGKLPQSEEQCNLVNWATECLNDKRSISYMIDPNLQSFKDNELDVICEVIQDCIQPDSKLRPTMRDITSKLKEVLSVTPEQAVPRLSPLWWAELEILSVETT 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00419 700 Pfam Protein tyrosine and serine/threonine kinase 420 669 IPR001245 GO:0004672|GO:0006468
Car01g00419 700 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
Car01g00419 700 PANTHER LRR RECEPTOR-LIKE KINASE 1 700 - -
Car01g00419 700 Pfam Leucine rich repeat 98 158 IPR001611 GO:0005515
Car01g00419 700 Gene3D Transferase(Phosphotransferase) domain 1 490 681 - -
Car01g00419 700 Gene3D Phosphorylase Kinase; domain 1 385 489 - -
Car01g00419 700 SUPERFAMILY Protein kinase-like (PK-like) 420 669 IPR011009 -
Car01g00419 700 MobiDBLite consensus disorder prediction 307 338 - -
Car01g00419 700 SUPERFAMILY L domain-like 30 161 - -
Car01g00419 700 Gene3D Ribonuclease Inhibitor 30 187 IPR032675 -
Car01g00419 700 PANTHER PROTEIN MALE DISCOVERER 2 1 700 - -
Car01g00419 700 ProSiteProfiles Protein kinase domain profile. 391 673 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g00419 700 MobiDBLite consensus disorder prediction 306 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00419 Car-Chr1 3291381 3297311 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00419 73 682 Receptor kinase-like Gene Family AT5G65700 25.380 3.55e-41 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Car01g00419 PK_Tyr_Ser-Thr 2e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00419 - - adu:107468254 874.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g00419 01 3291381 3297311 Car01g00419 01 3291381 3297311 ECH