Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car01g00409 | ATGGGTGAAGAGAACCAAGGGATTAAGCTATTTGGAGCAATAATAAAATTGCATGATGAAGAATTAAAAGAGGGTGAAAAAGGAAGCGAAGATCTAACGGTGGAGAAGAAGCCAGAGGAGATCATACCGTGTCCAAGATGCAAGAGCATGGAAACTAAATTCTGTTACTTCAACAACTACAACGTTAATCAACCAAGACATTTTTGCAAGACTTGTCAGAGATACTGGACGTCTGGTGGGGCCCTCCGTAACGTGCCGATTGGGGCCGGACGTCGGAAGCCCAAGCCCACCGACGGTGCACTTTATGAAACTAATTCGGGTGATGGCCATGATAAGTTTGGGTTGGTTTTGGATAAGTGGCAAGTCGACACGGCGGAGAGTAATTTCCGGCAAGTTTTATCCGGCAAGCGGAGGAGGACGACCTCAGCTTAA | 432 | 0.4676 | MGEENQGIKLFGAIIKLHDEELKEGEKGSEDLTVEKKPEEIIPCPRCKSMETKFCYFNNYNVNQPRHFCKTCQRYWTSGGALRNVPIGAGRRKPKPTDGALYETNSGDGHDKFGLVLDKWQVDTAESNFRQVLSGKRRRTTSA | 143 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car01g00409 | 143 | PANTHER | CYCLIC DOF FACTOR 2 | 4 | 141 | IPR045174 | GO:0003700|GO:0006355 | |
Car01g00409 | 143 | ProSitePatterns | Zinc finger Dof-type signature. | 44 | 80 | IPR003851 | GO:0003677|GO:0006355 | |
Car01g00409 | 143 | ProSiteProfiles | Zinc finger Dof-type profile. | 42 | 96 | IPR003851 | GO:0003677|GO:0006355 | |
Car01g00409 | 143 | Pfam | Dof domain, zinc finger | 40 | 95 | IPR003851 | GO:0003677|GO:0006355 | |
Car01g00409 | 143 | PANTHER | DOF ZINC FINGER PROTEIN DOF1.5-LIKE | 4 | 141 | - | - | |
Car01g00409 | 143 | MobiDBLite | consensus disorder prediction | 87 | 106 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Car01g00409 | Car-Chr1 | 3198353 | 3199940 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Car01g00409 | 3 | 142 | C2C2-Dof Transcription Factor Family | AT2G34140 | 50.307 | 2.55e-48 | 151 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2C2-Dof | Car01g00409 | zf-Dof | 6.5e-32 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car01g00409 | - | - | tcc:18596691 | 183.341 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Car01g00409 | 01 | 3198353 | 3199940 | Car01g00409 | 01 | 3198353 | 3199940 | ECH |