Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00407 ATGGCTTCCTCCAATCAAAACTTCGTCTACATCGCAAAGCTCGCTGAACAAGCCGAACGCTACGAAGAAATGGTTGATGCGATGAAGAAAGTTGCTAAGCTTGATGTTGAATTGACGGTTGAAGAGCGAAACCTTCTGGCAGTTGCTTACAAGAATGTAGTTGGAGCACGTAGGGCGTCTTGGAGGATTATTTCCTCCATTGAACAAAGGGAAGAAGCGAAAGGGAACGATGCAAATGTGAATCGGATTAAGGAGTATAGGAAAAAGGTTGAATCAGAGTTGTCTGATTTCTGCGCTGATATCATGACTGTGATTGATGATCATCTCATTCCCCATTCTTCTGGTGAATCTCATGTATTTTACTACAAAATGAAAGGTGACTACTACCGTTATCTGGCTGAGTTTAAGAGTGGTGATGAGAGGAAAGAGGTTGCTGATCAGTCCTTGAAAGCATATCAGAAAGCTTCAGCTGCTGCCGAGGCTGAGTTACCTCCCACACATCCCGTCAGTCTGGGTTTGGCTTTGAACTTCTCTGTCTTCTATTATGAAATCTTGAACTCTCCTGAAAGGGCATGTCACCTTGCCAAACAGGCATTTGATGGAGCAATCTCTGAATTGGATTCTCTTGGTGAGGAGTCTTACAAAGACAGCACACTGATCATGCAGCTTCTGAAGGACAACCTCACCTTGTGGACTTCTGACATTCCTGAGGAAGGAGCTGATGAACAAAAGGTGGAGTCTGCCCGTGCTCCTGCGGGAAATAATGCAGAGTAA 774 0.447 MASSNQNFVYIAKLAEQAERYEEMVDAMKKVAKLDVELTVEERNLLAVAYKNVVGARRASWRIISSIEQREEAKGNDANVNRIKEYRKKVESELSDFCADIMTVIDDHLIPHSSGESHVFYYKMKGDYYRYLAEFKSGDERKEVADQSLKAYQKASAAAEAELPPTHPVSLGLALNFSVFYYEILNSPERACHLAKQAFDGAISELDSLGEESYKDSTLIMQLLKDNLTLWTSDIPEEGADEQKVESARAPAGNNAE 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00407 257 Coils Coil 11 31 - -
Car01g00407 257 PANTHER 14-3-3 DOMAIN-CONTAINING PROTEIN-RELATED 4 243 - -
Car01g00407 257 SUPERFAMILY 14-3-3 protein 6 234 IPR036815 -
Car01g00407 257 PIRSF 14-3-3 1 245 IPR000308 -
Car01g00407 257 MobiDBLite consensus disorder prediction 235 257 - -
Car01g00407 257 SMART 1433_4 5 245 IPR023410 -
Car01g00407 257 Pfam 14-3-3 protein 12 232 IPR023410 -
Car01g00407 257 PRINTS 14-3-3 protein zeta signature 37 66 IPR000308 -
Car01g00407 257 PRINTS 14-3-3 protein zeta signature 86 110 IPR000308 -
Car01g00407 257 PRINTS 14-3-3 protein zeta signature 116 138 IPR000308 -
Car01g00407 257 PRINTS 14-3-3 protein zeta signature 151 177 IPR000308 -
Car01g00407 257 PRINTS 14-3-3 protein zeta signature 178 204 IPR000308 -
Car01g00407 257 PRINTS 14-3-3 protein zeta signature 205 234 IPR000308 -
Car01g00407 257 Gene3D - 1 246 IPR036815 -
Car01g00407 257 PANTHER 14-3-3 PROTEIN 4 243 IPR000308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00407 Car-Chr1 3189384 3193217 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00407 8 257 14-3-3 family AT2G42590 75.197 8.17e-141 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00407 K06630 - gmx:100807980 410.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g00407 01 3189384 3193217 Car01g00407 01 3189384 3193217 ECH
Car01g00407 01 3189384 3193217 Car06g00992 06 9673463 9676930 ECH