Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00403 ATGTCAACTCCTtcatcatcatcatcttcttcttcaATTTGGGTACTTTCTAACAATAAACTTCAATTCTTTACTCGTATCAGAAGGTTTCTTCAATCCAAAGCAACCCGAAAACGCTGCGACCCAACTGAATTTTTCAACAAAGAAAAAAGCAGAGGTGAACAGAACATGGTTGAACAGGTTGAAAAAGTTGAAGTTATGGAGAATCATAAGGAGGAGAAGGAAGAAGTGTCTGAAATTCTGCTGCAGAAGACAGTGAAAATGCTTCACTTTGGAAGCTGGGAAGAGAAAGAAGTAGCTGCAAAGGAGATTGAAAGTTTAGTTAAAGAAGATGTTAAAGTTAAGAAGTTGATAACAGAACTTGGGGTGGTGCCGGTTTTGGTATCGATGGTGGCGTCGACGGTGGCTAGTCGTCGGAGAGCAGGGTTGACGGCGTTGATCTATTTAGCTGATGGAACTTACACGAACAAGGCTTTGATAATGGAGGCAGGAATATTATCCAAACTACCTAAACAAATTGACTTTCTAGATGAGTCAACCATAAATGAGTTTGCTGAGTTACTTTTATCATTATCATCACTTGCAAACACCCAATTTCCATTTCCTTCATTAGAATTTCTACCATTCCTTACACAAATTCTTGAAAAAGACACAACTTTTGATACCAAAAGATCATGTTTAGGAGCCTTATACAACCTATCAACCATGTTAGAAAATGCAACCCCTTTAATTTCTTATGGGGTTGTCTCAATTCTCTTGGAGCTTTCCTTAGTGAAAGAAATTTCAGAAAAAGCACTTGCTACATTAGGTAACTTGTTAGTGACTTTAATGGGAAAAAAAGCAATAGAGAACAATTCAATGGTGCCACTAAATTTTGTTGAGATTTTATCATGGGAAGATAAACCAAAATGCCAAGAATTATCGGTTTATATTTTGATGATTTTAGCACATCAAAGTTCATCACAAAGAGAGAAAATGGAACAAGCTAGGATTGTTCCTTTGCTTCTTGAAGTTGTTTTATTAGGGAGCACTTTAGCTCAAAAAAGAGCAATGAAACTATTGCAATGGTTTAAGGATGAAAGACAAGTAAAGATGGGACCACATTCTGGTCCACAATCACCAAGATTTGCTATGGGGTCACCTTTGAATCAAAGAGATACAAAAGAAGGGAAGAAATTGATGAAGAGTTTGGTGAAACAAAGTTTGCATAAGAATTTGGAAATAATTACTCAAAGGGCAAATGCAAATGGGGAGTGCTctaaatttaagtcattggttattagcacaagttccaagagtttgccatattga 1311 0.3471 MSTPSSSSSSSSIWVLSNNKLQFFTRIRRFLQSKATRKRCDPTEFFNKEKSRGEQNMVEQVEKVEVMENHKEEKEEVSEILLQKTVKMLHFGSWEEKEVAAKEIESLVKEDVKVKKLITELGVVPVLVSMVASTVASRRRAGLTALIYLADGTYTNKALIMEAGILSKLPKQIDFLDESTINEFAELLLSLSSLANTQFPFPSLEFLPFLTQILEKDTTFDTKRSCLGALYNLSTMLENATPLISYGVVSILLELSLVKEISEKALATLGNLLVTLMGKKAIENNSMVPLNFVEILSWEDKPKCQELSVYILMILAHQSSSQREKMEQARIVPLLLEVVLLGSTLAQKRAMKLLQWFKDERQVKMGPHSGPQSPRFAMGSPLNQRDTKEGKKLMKSLVKQSLHKNLEIITQRANANGECSKFKSLVISTSSKSLPY 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00403 436 SUPERFAMILY ARM repeat 84 356 IPR016024 -
Car01g00403 436 Gene3D - 63 366 IPR011989 -
Car01g00403 436 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 71 436 - -
Car01g00403 436 MobiDBLite consensus disorder prediction 364 387 - -
Car01g00403 436 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 71 436 - -
Car01g00403 436 SMART arm_5 235 274 IPR000225 GO:0005515
Car01g00403 436 SMART arm_5 153 193 IPR000225 GO:0005515
Car01g00403 436 SMART arm_5 111 151 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00403 Car-Chr1 3151813 3155710 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00403 95 383 U-box Gene Family AT1G67530 29.043 6.06e-20 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00403 - - gmx:100813828 626.706
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g00403 01 3151813 3155710 Car01g00403 01 3151813 3155710 ECH