Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00386 ATGATGAAAACCATTAAGCGCACTCTCATTTTTCCTTCTCACACCCCCTTCCTCGAAGACCACACCCTCCCTCTCTCCCACATCGACACCGATCGCAACCTCCACTTAACCTTCCGCTACCTTCGCACTTAcaccgccacaacaacaaccaccaccgacgaccccttccacGTCATCACTTCCTCTATCTCAAAAACTCTCCCGCACTACTACCAACTCGCCGGCACACTTCGCCGCCGTCAACACCCTGACAACCGCCTCGAACTCCACTGCACTGCCAATCAAGGCGTCCCTCTGATCCACGCCACCGTAGACTTCACCCTCGATTCCGTCAATTACCTCGATGATGACCCTGCTTCACCTTTCGTCGAACAGTTGGTGCCCGATCCAGAATCCGAAGAGGGAATGGAACATCCATGTATGCTTCAGCTTACTGTTTTCAAGTGCGGTGGGTTCACTCTCGGTGCAGCGATTCACCACTCGCTATGCGACGGGATTGGTGGGACTATGTTTTTTAACGCGGTGGCTGAGTTGGCTCGCGGGTCGACTCGGATAACGGTGGAGCCTGTTTGGGATCGAGAGAAGTTGTTGGGTCCAAGGGACCCTCCACGTGTCGATTCTCGGTTGGTAGGTGAGTTTCTTAGTTTGGATAAGGAGTTTTTGGCTTACAAAGAGGATGTTGGTGTTATTGTGAGAGAGTGTTTTCATGTGAGGGATGAGTGCTTAGAGAAGTTCAAGAGATCATTGTTTGACCAATCTGGATTCAACTTCACCACTTTTGAAGCTCTAGGTGCATACATTTGGAGGTCCAAGATAAAGGCTTCGCGAGTGAAGGATAATGAGAAAGTTAAGTTTGCATACTCAATAAATATACGGAGACTAGTAAAGCCATCACTACCTTCTGGCTACTGGGGCAATGGTTGTGTTCCAATGTATGTGCAATTGAGTGCCAAAGATTTAATAGAGCAACCCATTTGGAAAACAGCAGAGCTAATAAGAAATAGTAAAAGCAATGTTACTGATGAGTATGTTCGTTCCTTCATCGATTATCAACATCTACATTTTGCTGATGGGATCACAGCAGGGAAATGGGTGAGTGGTTTTACTGATTGGAGACACTTGGGCCATTCTACTGTGGACTATGGATGGGGAGGCCCAGTTACTGTTTTGCCACTTGCTAGAAACTTGCTTGGGAGTGTTCAACCTTGCTTCTTTTTGCCTTATTCAACGGCTGGTGTTCAGAAAAAAGAGGGGTTTAAGGTTTTGGTGTCTTTGATTGAGGAAGCTTTGTTTGCTTTTAGAGAGGACATGCAAATCTTTTCTAGTAGTCAAGAGCGAGCCAAGTATTGA 1350 0.4533 MMKTIKRTLIFPSHTPFLEDHTLPLSHIDTDRNLHLTFRYLRTYTATTTTTTDDPFHVITSSISKTLPHYYQLAGTLRRRQHPDNRLELHCTANQGVPLIHATVDFTLDSVNYLDDDPASPFVEQLVPDPESEEGMEHPCMLQLTVFKCGGFTLGAAIHHSLCDGIGGTMFFNAVAELARGSTRITVEPVWDREKLLGPRDPPRVDSRLVGEFLSLDKEFLAYKEDVGVIVRECFHVRDECLEKFKRSLFDQSGFNFTTFEALGAYIWRSKIKASRVKDNEKVKFAYSINIRRLVKPSLPSGYWGNGCVPMYVQLSAKDLIEQPIWKTAELIRNSKSNVTDEYVRSFIDYQHLHFADGITAGKWVSGFTDWRHLGHSTVDYGWGGPVTVLPLARNLLGSVQPCFFLPYSTAGVQKKEGFKVLVSLIEEALFAFREDMQIFSSSQERAKY 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00386 449 Gene3D - 1 210 IPR023213 -
Car01g00386 449 Gene3D - 223 436 IPR023213 -
Car01g00386 449 PANTHER N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE, PUTATIVE-RELATED 3 441 - -
Car01g00386 449 Pfam Transferase family 2 438 - -
Car01g00386 449 PANTHER ACYL TRANSFERASE 4 3 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00386 Car-Chr1 3037290 3039157 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00386 44 391 Monolignol Biosynthesis Gene Families AT5G48930 29.282 5.58e-36 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00386 - - gmx:100817021 682.945
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g00386 01 3037290 3039157 Car01g00386 01 3037290 3039157 ECH