Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00384 ATGGGTTCTGGTTTTTGGTTTAAAACAATAATTAGCCTAAGGAAATCAAAAAGCAGATCAAAGAAAGCAAAGGGTACCTTAGCTCCAGAGAAGCTAAGCGCATTGAAATCGAACAAATATACAGGAAAAGAGTCTAGTGGATTAGCAAATGGTATCCAAAATGATAATCTCGTGGCAATTGAAACTATTGCTGCAACGAGAATCCAGACTGCATTCCGTGCTTATAAGGCTAGGAAAGCTCTACGACGATTGAAAGGTTTCACAAAACTGAAGATTTTAACGCAAGGTTACTCTGTTCAAAAGCAAGCCAGTACAACTATAACATACCTTCATTCATGGAGCAAGATACAGGGTGAGATAAGAGCTCGTCGAATCTGTATGGTGACAGAAGACAGGATCAAGCGGAAGAAACAAGAGTCTCAACTAAAACTTGAGGAAAAGCTCCATGATTTGGAGGTTGAATGGTCTGGCGGTCCTGAAACCATGGAAGAAACCCTTGGGAGGATACATCATAGAGAAGAAGCAGCTGTAAAGCGTGAAAGAGCCATGGCTTATGCCTTTTCTCATCAGTGGAGGGCAAACTCTAGTCAGAGCCAAGTGCTAGGTAGTTATGAACTCGGAAAAGCTAACTGGGGTTGGAGCTGGAAGGAACGCTGGATCGCGGCTCGCCCATGGGAAAGCCGTGTTGCTAGCAGCACTAGTCCAAAGAAAACTCAAAACAAGCTATCTTTCAAGGTTCAGAAGAATAAAAGCACATCAACTTCTAAAACTTCAGTTTCAGTAACACCTACTTCCTCCAATGCAAAAGGAACTCCTCCTTTAGGTAATGCTAAAGGGAGTGCCAAACCTAGGAGATTGTCTTATCCAACCACCACAGAGAAAATAATAATAATGAGTTCAAACGAGGTACGAGGTTCACAAAGGTTACAAACTTTGTTTCATCACCTCCAATCTTCCAATTCCATGTCGACCAATAATTCAGTCAACAAAAGAGCAGCGGTTCTTATTTGTTTATTCGAAGGGCAAGATGGTAATCTCCGAGTAATTCTCACGCAGCGTTCTTCTTCTCTCTCAACACACGCGGGTGAGGTTGCTTTGCCAGGTGGCAAAAGGGACGAAAGTGATGCTGATGATGTTCAAACTGCGTTAAGAGAAGCTAAGGAGGAAATTGGCTTAGACTCTTCTCTTGTTTCTGTTATTACTCTTCTTGAACCCTTCCGTACTAAGTATGGCATCACAATAATACCAGTGGTTGGACTACTGTCCAACAAGGATGCATTTTCACCAGTTTTGGATTCCGCTGAAGTTGAAGCAGTATTTGATGTTCCCTTAGAGATGTTCCTCAAGAATGATAATAGAAGAGCTGAGGAAAAAGAATGGATGGGAGAGAAGTATCTTGTACATTATTTTGATTATGAGGTAGAGAACAAAAAGTATGTGATTTGGGCTATAACTGCCTCAATCTTAATTAGGGCTGCTACCGTTTTACTTCACCAGCCGCCAGCTTTTCTAGAGCAGAGACCTATAATCTGGGGAGGAATTACTGAAAATGATAAGATAAGACTACATAATAGTTCCCAAATGTGA 1587 0.4152 MGSGFWFKTIISLRKSKSRSKKAKGTLAPEKLSALKSNKYTGKESSGLANGIQNDNLVAIETIAATRIQTAFRAYKARKALRRLKGFTKLKILTQGYSVQKQASTTITYLHSWSKIQGEIRARRICMVTEDRIKRKKQESQLKLEEKLHDLEVEWSGGPETMEETLGRIHHREEAAVKRERAMAYAFSHQWRANSSQSQVLGSYELGKANWGWSWKERWIAARPWESRVASSTSPKKTQNKLSFKVQKNKSTSTSKTSVSVTPTSSNAKGTPPLGNAKGSAKPRRLSYPTTTEKIIIMSSNEVRGSQRLQTLFHHLQSSNSMSTNNSVNKRAAVLICLFEGQDGNLRVILTQRSSSLSTHAGEVALPGGKRDESDADDVQTALREAKEEIGLDSSLVSVITLLEPFRTKYGITIIPVVGLLSNKDAFSPVLDSAEVEAVFDVPLEMFLKNDNRRAEEKEWMGEKYLVHYFDYEVENKKYVIWAITASILIRAATVLLHQPPAFLEQRPIIWGGITENDKIRLHNSSQM 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00384 528 PANTHER NUDIX HYDROLASE 326 518 IPR045121 GO:0010945
Car01g00384 528 CDD CoAse 330 490 IPR045121 GO:0010945
Car01g00384 528 ProSiteProfiles IQ motif profile. 61 89 IPR000048 GO:0005515
Car01g00384 528 PANTHER NUDIX HYDROLASE-LIKE PROTEIN 326 518 - -
Car01g00384 528 Pfam NUDIX domain 330 451 IPR000086 -
Car01g00384 528 Coils Coil 134 154 - -
Car01g00384 528 MobiDBLite consensus disorder prediction 226 288 - -
Car01g00384 528 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 300 494 - -
Car01g00384 528 SUPERFAMILY Nudix 329 489 IPR015797 -
Car01g00384 528 ProSiteProfiles Nudix hydrolase domain profile. 329 467 IPR000086 -
Car01g00384 528 MobiDBLite consensus disorder prediction 227 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00384 Car-Chr1 3027232 3033704 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00384 1 289 IQD Protein Family AT2G33990 53.633 2.32e-86 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00384 - - var:108341135 414.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g00384 01 3027232 3033704 Car01g00384 01 3027232 3033704 ECH