Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00378 ATGGAGAACTCTGATAGAAGATTGTTTTTTTCTTTTATGAAAATGATTTTCATTCTTTGCTTGTTATTATGTTTCACATCAAGTGTTGAATCTTTAAACAAAAAAGTCTCTGGCTTTTATGTATTTGGAGATTCCACAGTAGACCCTGGAAATAATAACTATATAAATACACCTTTCAGAAGCAACTTTCCACCATATGGAAGAGATTTTACAAATCATGTTCCTACTGGAAGATTCTCTAATGGAAAGCTATCCACTGATTTCATTGCTGCTTATGTAGGTGTGAAAAAAGAGCTTCTTCCAGCTTATTTGGATCCAAATTATAGGAACAATGTTGAAGAGCTTATGACAGGAGTTAGTTTTGCTTCTGCTGGTTCTGGATATGATCCACTTACACCAACCATCTCTAATGTAATTCCAATACCAACTCAGGTGGAATATTTCAGAGAATGCAAAAAGAAGATGGAAGCTGTGATTGGCAAACAAAGTACTGAAAATCATATGAAGAATGCAGTATTTTTCATGAGTGCTGGTACAAATGACTTTGCTCTTAATTATTTTACTCTGCCAATAAGAAGACAGAGCTATACTACTATATTAGCCTACCAGCAGTTCTTGATCCAACATATCAAACAATTTTTACAGGATTTGTTGGCAGAAGGAGCTAAAAAAATTGCAATAGCTGGAGTACCTCCAATGGGATGTCTACCAATGATGATCACCATGCATTCCCCTAATGCCTTTTTGCAACGTGATTGTATAGAAAAATATTCATCCATAGGTAGAGATTTCAATCAGCTCCTTCAACATGAATTACACCTAATGCAATTGCAGCTCAATTTATCTAGTCCAGATGCTAAGATCTATTACATTGACATATATGGACCCATAGCCAATATGATCCAAGCCCATCAAAGATATGGATTTGAAGGTATTAATAGTGGATGTTGTGGAAGTGGATACATTGAAGCATCAATTTTGTGCAATAAGGCTTCAAGTGTGTGCCCTGACCCATTTAAGTATATATTTTGGGATTCAATTCATCCAACAGAGAAGGCATATCACAACCTCTTCTTGACTTTCCAACCAACCATTGATTTCATTGTTAACAACTAG 1116 0.3539 MENSDRRLFFSFMKMIFILCLLLCFTSSVESLNKKVSGFYVFGDSTVDPGNNNYINTPFRSNFPPYGRDFTNHVPTGRFSNGKLSTDFIAAYVGVKKELLPAYLDPNYRNNVEELMTGVSFASAGSGYDPLTPTISNVIPIPTQVEYFRECKKKMEAVIGKQSTENHMKNAVFFMSAGTNDFALNYFTLPIRRQSYTTILAYQQFLIQHIKQFLQDLLAEGAKKIAIAGVPPMGCLPMMITMHSPNAFLQRDCIEKYSSIGRDFNQLLQHELHLMQLQLNLSSPDAKIYYIDIYGPIANMIQAHQRYGFEGINSGCCGSGYIEASILCNKASSVCPDPFKYIFWDSIHPTEKAYHNLFLTFQPTIDFIVNN 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00378 371 CDD SGNH_plant_lipase_like 39 355 IPR035669 -
Car01g00378 371 Pfam GDSL-like Lipase/Acylhydrolase 40 358 IPR001087 GO:0016788
Car01g00378 371 Gene3D SGNH hydrolase 27 366 IPR036514 -
Car01g00378 371 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 9 368 - -
Car01g00378 371 SUPERFAMILY SGNH hydrolase 168 364 - -
Car01g00378 371 PANTHER GDSL ESTERASE/LIPASE EXL3 9 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00378 Car-Chr1 2972622 2980921 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00378 14 357 Pollen Coat Proteome AT1G75910 33.711 5.90e-61 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00378 - - gmx:100788326 569.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g00378 01 2972622 2980921 Car01g00378 01 2972622 2980921 ECH