Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00361 ATGGGTTTAATCGATCTTAACACTACTGAGGAAGATGAAACTCCAtcttcagctatttcttcttcctcttcttcttctCACTCTGGTATAAGCACTTCTGCTTCGGCTATGGTTCCTCCTCAACCTTCTGTTTGTTTGGAACTATGGCATGCTTGTGCTGGCCCTTTGATCTCTCTTCCAAAGAAAGGAAGCATTGTTGTGTATGTTCCTCAAGGACACTTTGAACAAGCTCAGGATTTTCCTGTTCCTGCTTGTAATATTCCACCTCATGTTTTCTGTCGTGTTCTTGATGTCAAGCTCCATGCAGAGGAAGGGAGTGATGAAGTGTATTGCCAAGTCTCGTTGGTTCCTGAAAATCAGCAAGCGGAGCAAAACATTCGGGAAGGAGAAATTGATGCTGATGCAGAAGAGGAGGATACTGATGCTTTGGTGAAGTCAACAACACCACATATGTTCTGCAAGACTCTCACAGCTTCTGACACTAGCACTCATGGAGGATTCTCAGTGCCTCGTCGAGCAGCTGAAGATTGCTTTCCTCCCCTGGATTACAGCCTGCAAAGACCTTCACAAGAGCTGGTAGCCAAGGATTTGCATGGTCTGGAGTGGAGGTTTCGACATATATACAGGGGGCAGCCAAGGAGGCATTTGCTCACAACTGGGTGGAGTGCATTTGTGAACAAGAAGAAGCTAGTGTCCGGCGATGCCGTGTTGTTTCTTAGAGGTGCGGATGGAGAATTGAGATTGGGGATTCGAAGGGCTGTTCAGTTGAAAAGTTCTGGTTCCTTTGCTGCTCCCTCTGGTCTGCAATTGGATCCTGGCTCTCTCATGGATGTTGTGAATGCTTTGTCGAAGAGATGTGCGTTCAGTGTTTGCTATAATCCAAGGGTCAGTTCTTCAGAATTCATCATACCTGTCAACAAATTCATGAAGAGCCTTGATTGTTCTTATTCTGTTGGAATGAGGTTTAGGATGCGTTTTGAAACCGAAGATGCTGCAGAACGAAGATTCACTGGATTAATTGCTGGAATAAGTGATGTGGATCCTGTTAGATGGCCAGGATCAAAATGGAAATGCCTATTGGTGAGGTGGGATGACATAGAAGCATCAAGGCATAACAGGGTTTCCCCTTGGGAAATTGAGCCATCTGGTTCTGCTTCCACTTCCAGTAACCTGATGGCAGCTAGTTTGAAGAGGAGTAGGATTGGATTCACTTCAGGAAAGCTAGAATTTCCAGTTCCCAATGGGATTGGTGTGTCGGACTTTGGGGAATCGTTGAGGTTCCGAAAGGTCTTGCAAGGTCAAGAAATTATGGGTGTTAATACTCCTTATGAAAGTATTAATGCTCAGAGTCCCCGGTTATTTGAGCTAGGGAGGTGCTATCCCGGTTCTAACTGTTCCGGGATAGCTGCAACAGGAAATATCAGAATGCCACAAGTGACTTCTGATTTTTCCAGTAATGGCGTAGGCTTTGGTGAATCTTTCCGATTCCAAAAGGTCTTGCAAGGTCAAGAAATTTTTCCGTGTCCACCCTACGGGAGAGCCGCGTTTGACGAGGCCCGTGGAAATGGTTGCTTTGGACGTTACGATGGTTATCAGCTGCTCGGCTCCAGAAATGGTTGGCCTGCGCAGATGCACGACAACTCTTCACATTTGCATGCATCCGTTACATCTGGACAGGTGTCATCTCCATCATCTGTGTTAATGTTCCAGCAGGCTGTTAATCCAGTTTCAAACTCTCATTTTGATAACACTAATCGCTATCAGGAGAAGGACAATAAACTCCGTTACCAAGGCTCATACATATCCGAAGCAAAAAATGGAATGTTCACGCCTTCACTACCCGACAAACCTATTTTCTCTAGTGGACTAGCTCAGGAAGGCACAAATCCTTTTGGTATGCATGATTTTCataataataacaatattaataatCAGTCCAACAATTCAAGGCTTCACGATTCAGTTGCAATACCGAGAGGCAATCAAGATATGGTTTCGTCATGTAAAACTGGCTGCAGACTCTTTGGGTTTTCATTAACCGACGACACGAACATTACAAATAAAGAAGCTGCTGTTGCCTCTACTATCACTTCTCAATTGAATTCTGGACCTTCCATTCAAGCCATGCGCTAA 2133 0.4407 MGLIDLNTTEEDETPSSAISSSSSSSHSGISTSASAMVPPQPSVCLELWHACAGPLISLPKKGSIVVYVPQGHFEQAQDFPVPACNIPPHVFCRVLDVKLHAEEGSDEVYCQVSLVPENQQAEQNIREGEIDADAEEEDTDALVKSTTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSLQRPSQELVAKDLHGLEWRFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGADGELRLGIRRAVQLKSSGSFAAPSGLQLDPGSLMDVVNALSKRCAFSVCYNPRVSSSEFIIPVNKFMKSLDCSYSVGMRFRMRFETEDAAERRFTGLIAGISDVDPVRWPGSKWKCLLVRWDDIEASRHNRVSPWEIEPSGSASTSSNLMAASLKRSRIGFTSGKLEFPVPNGIGVSDFGESLRFRKVLQGQEIMGVNTPYESINAQSPRLFELGRCYPGSNCSGIAATGNIRMPQVTSDFSSNGVGFGESFRFQKVLQGQEIFPCPPYGRAAFDEARGNGCFGRYDGYQLLGSRNGWPAQMHDNSSHLHASVTSGQVSSPSSVLMFQQAVNPVSNSHFDNTNRYQEKDNKLRYQGSYISEAKNGMFTPSLPDKPIFSSGLAQEGTNPFGMHDFHNNNNINNQSNNSRLHDSVAIPRGNQDMVSSCKTGCRLFGFSLTDDTNITNKEAAVASTITSQLNSGPSIQAMR 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00361 710 MobiDBLite consensus disorder prediction 1 35 - -
Car01g00361 710 Pfam B3 DNA binding domain 152 253 IPR003340 GO:0003677
Car01g00361 710 ProSiteProfiles B3 DNA-binding domain profile. 152 254 IPR003340 GO:0003677
Car01g00361 710 CDD B3_DNA 150 252 IPR003340 GO:0003677
Car01g00361 710 Gene3D - 150 254 IPR015300 -
Car01g00361 710 Coils Coil 119 139 - -
Car01g00361 710 SMART B3_2 152 254 IPR003340 GO:0003677
Car01g00361 710 Gene3D - 315 389 - -
Car01g00361 710 PANTHER AUXIN RESPONSE FACTOR 36 698 - -
Car01g00361 710 MobiDBLite consensus disorder prediction 9 35 - -
Car01g00361 710 Pfam Auxin response factor 279 359 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Car01g00361 710 SUPERFAMILY DNA-binding pseudobarrel domain 145 259 IPR015300 -
Car01g00361 710 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 36 698 IPR044835 GO:0003677|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00361 Car-Chr1 2832994 2838152 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00361 151 508 B3 DNA Binding Superfamily AT2G33860 59.669 1.99e-143 425
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Car01g00361 B3 1.4e-21 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00361 K14486 - gmx:100789906 1057.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g00361 01 2832994 2838152 Car01g00361 01 2832994 2838152 ECH