Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00358 ATGGTGAGATGGTGCAATACTGACTCTGATCATGAGGAAAGGGAAAATGAATTAATCACACCATCTATTACTCCTAAATTAGATAACAACAAAACTGATGTTACTGATCATGATGAAATTCAAACCATAAAATGCCCCTCATGTGGTCATAACATTGAAATCAAGGATCAGGGTGGAATTAATGAGTTGCCAGGGCTACCAGCTGGAGTGAAATTTGACCCAAGTGACATAGAAATACTAGAGCATTTAGAAGCAAAAGTGATGTATGATGTGTGTAAGCTTCATCCACTTATTGATGAGTTCATACAAACGCTTGAAGGAGAAAATGGAATATGTTACACACACCCAGAAAAGTTACCAGGAGTTAACAAAGATGGACAAATCCGCCACTTTTTTCACAGACCTTCAAAAGCATACACAACAGGAACAAGAAAAAGAAGAAAAGTTCACACCGATGAAGAAGGAAGTGAAACAAGATGGCACAAAACAGGAAAAACTAGAGCAGTTTTTGCTAATAGTGTTGTGAAGGGTTATAAAAAGATATTAGTACTCTACACCAACTATTGCAATAGGCAAACAAAACCTGAGAAGACTAATTGGGTGATGCACCAATACCATCTTGGTAGTAACGAAGAAGAAAAAGACGGAGAATTAGTTGTTTCAAAAGTCTTCTACCAAACACAGCCTAGACATTCTGGTAATTCCATTATTGTAAGAGATTCATATGAAAAAGTAATTAACAACGGAATTGGTCATGGTAAAAATGCTACAATACCCAACAATTTAACTCATGTGGAATGCTACAATGATCCTTTTACAAATTATGACCATGTACATGTTGGTGGTCATATTAGTGAAAGTTCACAACAACTTATTCCAAACTTAAGAGGTGCAAGGTGA 900 0.3622 MVRWCNTDSDHEERENELITPSITPKLDNNKTDVTDHDEIQTIKCPSCGHNIEIKDQGGINELPGLPAGVKFDPSDIEILEHLEAKVMYDVCKLHPLIDEFIQTLEGENGICYTHPEKLPGVNKDGQIRHFFHRPSKAYTTGTRKRRKVHTDEEGSETRWHKTGKTRAVFANSVVKGYKKILVLYTNYCNRQTKPEKTNWVMHQYHLGSNEEEKDGELVVSKVFYQTQPRHSGNSIIVRDSYEKVINNGIGHGKNATIPNNLTHVECYNDPFTNYDHVHVGGHISESSQQLIPNLRGAR 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00358 299 Gene3D NAC domain 76 230 IPR036093 GO:0003677|GO:0006355
Car01g00358 299 PANTHER NAC DOMAIN-CONTAINING PROTEIN 10 3 295 - -
Car01g00358 299 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 3 295 IPR044799 GO:0003700
Car01g00358 299 Pfam No apical meristem (NAM) protein 67 207 IPR003441 GO:0003677|GO:0006355
Car01g00358 299 SUPERFAMILY NAC domain 62 226 IPR036093 GO:0003677|GO:0006355
Car01g00358 299 ProSiteProfiles NAC domain profile. 66 226 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00358 Car-Chr1 2800797 2804133 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00358 4 238 NAC Transcription Factor Family AT4G28500 67.797 4.84e-111 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Car01g00358 NAM 1.2e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00358 - - cam:101512871 634.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g00358 01 2800797 2804133 Car01g00358 01 2800797 2804133 ECH
Car01g00358 01 2800797 2804133 Car06g01622 06 16039707 16043960 ECH