Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00357 ATGAATCTTGGAGAACATATAGCTTATGACATAATCATGGCAACTCTATCAATGTCTCTAATAGTTCTTGGTGTTTTCCTCTTCTATTATTGCAAAAAGAAACCAGTTGAATCAGAAGAAACACTTCCAATAAAACAAAGTGCTCGTGCATACCCTTTAACAGAAATCGATGCTGCAACAAACGGCTTCAACCATAGAAGAATTATTGGTAAAGGTCGTTTAGGAACAGTTTATGCAGGAACACTACAAGAGCTTGTAGCTGTGAAACGAATTCACCCTGTTCTTGTTTTAAGCAAAGCAGGTTTTGGTTTCTCATCAGTGATGAAATCTCTCTCTTTAGCTCAACACACCAACGTTGTATCTATCATAGGATTCTCAGAAGGACCAGGTGAAAGAATTATAGTTATGGAATTTATCCGAATGTCAAGTTTGGATTTTTACTTGCATGGAGACAATGATGGAGCTTCACTTTTGGATTGGAACAAGAGGTTTAAGATTGCAGCTGGTGTAGCTAGAGGGCTTCAATATCTTCATGAAGTTGTGTCACCAAATATTGTACATGGTTGTGTTAAGTCCTCTAATGTTCTTATTGATGTTAATTTTTGTGCTAGGATTTGTGATTATGGACTTAATTTTTTTGGGTTGGTTGAAAAAAGAGGGTTAATTGGTTATGTGGATGATGAATATTGGAATAATGAAGGAAATGGTTTAGGTGGTTCTAAGGAAAGTGATGTTTATGGGTTAGGGGTTATTTTGTTGGAGATTTTAAGTGGGAGAGAGTGTGAGGGAGGATTGTTGGTGAAGTGGGCATTGCCTTTGATTAAGGAAATGAGATTTAGTGAAGTTTTGGATCCTAGGTTAGTTATTCCTTGTGATATGAAACCTTTTGTTAGATTAGCAAAAGTTGCTTTGGCTTGTGTTGGTAATTCAAGGAAATGTAGGCCTTGTGTGGATCATGTGGTAAATATTTTGAACAATTTAGAGATGGAAGTTTGTTTCTTATCAAATTGA 1011 0.361 MNLGEHIAYDIIMATLSMSLIVLGVFLFYYCKKKPVESEETLPIKQSARAYPLTEIDAATNGFNHRRIIGKGRLGTVYAGTLQELVAVKRIHPVLVLSKAGFGFSSVMKSLSLAQHTNVVSIIGFSEGPGERIIVMEFIRMSSLDFYLHGDNDGASLLDWNKRFKIAAGVARGLQYLHEVVSPNIVHGCVKSSNVLIDVNFCARICDYGLNFFGLVEKRGLIGYVDDEYWNNEGNGLGGSKESDVYGLGVILLEILSGRECEGGLLVKWALPLIKEMRFSEVLDPRLVIPCDMKPFVRLAKVALACVGNSRKCRPCVDHVVNILNNLEMEVCFLSN 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00357 336 Gene3D Transferase(Phosphotransferase) domain 1 140 332 - -
Car01g00357 336 PIRSF ILK 30 332 - -
Car01g00357 336 Gene3D Phosphorylase Kinase; domain 1 29 138 - -
Car01g00357 336 SUPERFAMILY Protein kinase-like (PK-like) 38 324 IPR011009 -
Car01g00357 336 ProSiteProfiles Protein kinase domain profile. 63 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g00357 336 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 3 332 - -
Car01g00357 336 Pfam Protein tyrosine and serine/threonine kinase 66 323 IPR001245 GO:0004672|GO:0006468
Car01g00357 336 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 3 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00357 Car-Chr1 2792672 2793962 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00357 40 325 Receptor kinase-like Gene Family AT3G59420 37.748 9.32e-53 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Car01g00357 PK_Tyr_Ser-Thr 5.9e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00357 - - mtr:MTR_2g014650 540.036
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g00357 01 2792672 2793962 Car01g00357 01 2792672 2793962 ECH