Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00351 ATGGATGTAGAAGCAGAGAACAATACACAGAAGGGTGATGATGGGGGTGagaatagcaatgagaataacaacaacaataacaacatgaataacaatggaagcaacagcaaAATTATGAGTTCAAGTGAAGGTCAAAGCAAACCCAAGCGTCAGATGAAAACCCCTTTTCAGCTTGAAACGCTAGAGAAAGCTTATGCTTTGGAGAATTACCCTTCGGAGGTGACAAGGGTAGAGTTGTCGGAGAAGTTGGGGTTGTCGGATCGACAGTTACAGATGTGGTTTTGTCACCGGAGGTTGAAAGACAAGAAGGAGTTGCCGCCTAAAAAGCCGCGAAAGGCGCCACCTTTACCGGATTCTCCAACTGATGAACTTAACCCCAAGTTGGCTATTGAACCCGTTAATGAATATGGATCCGGGTCGGGTTCTGGGTCTAGCCCGATTGCCCGGCCGGAGTTGCGGAGTGTGGTGCCTACTAGGACTTACTATGAGTCACCACAGACTATAATAGAGCTTAGAGCAATTGCTTGTGTGGAGGCACAGTTAGGGGAGCCTTTGAGGGAAGATGGGCCTATTTTGGGAACTGAGTTTGATCCATTGCCTCCTGATGCATTTGGGGCACCCTTAGCTGTTGCTGAACAGCAGAAGCGGCCTAGTCTTCCCTATGACAGTAAAATATATGAAAGACACGAAGTTAGAACAAATAAGGCAGTGGCAAGGACATTCCCTGAATATACATTTGTTCCGAGCCAGTCCAGCATTAGATCTGATACTTTTGGACAATTGAGTCAACCTCATTTATACGATTCAATGGAGGGTCCAACTAGAACTCCTCCCTTTCCGATTGGAAATGAACATTTACCTAGAGTTCATGCTTCTCAAAATCATTCTTCCCGTGCTCGCCTTTTGTCTCAGCAGGACAAGCCAGTGATTCCATATACTTCCCCTCCTCACCTTTTGTCTCAACAAGACAAGCAATTGATTCCCTATCCATCTCCTCCTCGAGATAATGATGTTGTCCCTAAAAGAGAACCTCACACAAACATAGCCAATACTAGCATGAACACCCAATTCTCTGATCACTTAATTGTTGGGCAAGAAAATTCTTTAGCTCTAGGTTTACCAGGTGGACAAGTTCTCCATAATGATGCGGTATTGCGGGTGGAGAAGAAACGGAAGAGTGACGATGCCAGAGTTGCAAAGGAAGTTGAAGCCTATGAAATAAGGATGAAGAAAGAACTAGAGAAACAAGATATCCTCAGAAAAAAGaatgaagagcgaatgaaaaaagaaatggaaagacaagatcgtgagagaaggaaggaagaagagaGGCTGATGCGTGAGAGACAACGAGAAGAGGAAAGATTAAAGCGTGAGCATAGGCGGGAACTAGAACGAAGGGAGAAATATTTGATTAAAGAACATTTAAGAGCTGAGAAAAGGAAGCAAAAAGAAGAGATTCGCAAAGAGAGGGAGGCAGAGAGAAGGAAAGCTGCCCTTGAAAAGGCAAATGCTCGTAGAATAGCTAAAGAATCTATGGAGCTCATTGAGGATGAACAGCTGGAATTGATGGAGTTGGCTGCAGCAAGCAAGGGGCTTTCCTCTATTATCCATATTGATCTTGATACTTTGCAAAACCTTGAATCATTTAGAGATTCCTTGTGTATTTTCCCGCCCAAAAGTGTAAAGCTAAGAAAACCGTTTGCTATCCAGCCCTGGATCAACTCGGAACAAAATGTTGGCAACCTTCTCATGGTTTGGAGATTCTTGATTACTTTTGCTGATGTTCTTGAATTATGGCCTTTTACTCTTGATGAATTTGTACAAGCATTTCATGATTATGATACAAGATTGCTGGGTGAGATACATGTTGCTCTTCTTAAAGTGGTAATAAAAGACATTGAAGATGTTGCAAGGACACCTTCAGGATTAGGATTGAACCAGAATGGAGCTGCTAATCCTGCTGGTGGCCATCCAGAGATTGTGGAAGGAGCATATACATGGGGATTTGACATACGAAATTGGCAGAAGAACTTAAATCAATTGACATGGCCTGAAATTTTGCGACAGTTGGCCCTATCTGCAGGATTTGGACCACAGCTAAAAAAAAGAAGTGTTACATGGTCAATTGCAAATGATAAAGATGAGGGAAGAAGTTGTGAAGATGTCATTTCTACACTTCGAAATGTGGCCAAAATGCGAGAGAAAGGTCTATTGGCTCCTCGAAAATCGAGACACAGGTTAACTCCAGGAACCGTTAAATTTGCAGCATTCCATGTTCTCTCTCTTGAGGGAAGCAAGGGTTTGAATGTACTAGACCTTGCAGAAAAGATTCAGAAATCTGGTCTTCGGGACCTGACGACCAGCAAGACACCTGAAGCATCGATTTCGGTTGCTTTGACAAGAGATGCTAAACTTTTTGAAAGAATAGCTCCATCAACATACCGTGTACGAACTGCATTTAGAAAGGATCCTGCTGATGCTGTGTCCATTCTTTCAGAAGCAAGAAAGAAAATTCAGATATTTGAAAATGGGTTTCTAGCtggtgaagatgccgatgatgttgaaagggaagaagagtcagaaagtgaTGGAGTTGATGAGGATCCTGAAGACGATGATTTAATGAATCCTTCAGGTGGAAACCAAGTTTCAGAACAGTATGATGATATGAATATTTGCTCTGTAAATGTAAAAGAAAATTTGGGCCATGATGTAGACCTTATCCTAAATGAGCTTGATACTGATCTGCCTTGTTTTCCTGAGAATGGTTCCAAGGATGCTGATTGTCCCAGTTCTGTCACCAGACAACCCGCTGCTTGTGAAAATCTAAATACTGGAAATCTCGATGATGATAATATGGAAATTGATGAAACCAAGTCTGGAGAATCATGGGTTCAAGGGCTTACCGAAGGCGAATATTCTGATCTCAAGCGTCTAAATGCTCTTGTTGCATTGGTCGGTGTGGCAAATGAAGGAAATTCAATTCGTATTGTTCTCGAGGATCGATTGGAAGCAGCAAATGCTCTGAAAAAGCAAATGTGGGCAGAAGCACAAATAGATAAAGTTCGTCTAAAAGATGATTATATTAGTAAGTTAGATTTCCCATCACTTACTGGAAATAAATTTGAAACACAAGACACATATCTTGCTGTGGAGGGAAACCAAAGCCCAATGCTCAACATGAATATAAACAACATTAAAAATGAAGCATCACCCAGCACTGCAGAAAATCAAAAAGAAGCTCCTGGTGCACAGAACCTACTTATTGAAAGGCCGTCGGCAGTTCAAGATTTCTGCACAGGCACAGGTCCAGACAACTTTCAGGCTCAGGTACCTGCACAATATTCAAAAAGGTCACGGTCACAGTTGAAATCTTATATTTCACACATAGCAGAGGAGATGTATGTCTACAGATCTTTACCCCTCGGCCAAGACCGCAGGCGTAATCGATATTGGCAGTTTGTTGCATCTGCTTCTAGTAATGATCCTGGTTCTGGCAGGATCTTTGTTGAACATCATGATGGTAGTTGGATGCTTATTGATTCTGAAGAGGCCTTTGATATTCTTTTGACATCACTGGATTCACGCGGGATCAGAGAATCTCATTTACGCTTAATGTTGCAAAAGATTGAGAAATCCTTTAAAGAAAATGTTCGAAAAAACACACAGTATGCAAAAGTTGGAAGCATCGGCGAAGTTTCAATTAAAACTGAAGCTAAAGAAACATATCCAAAGCCTGAGCACCATTCTCGATCTGACAGTCCTAGCAGTACCCTTCATGACTTGCACCCTGATGCATCAGAAACTTCATCATCCTTCAAAATTGAGATTGGCAAAAGTGAGAATGAAAAGAAAGCTGCCTTGAAAAGGTATCAAGATTTTCAGAAGTGGATGTGGAAAGAATGCTATAGTTCATCAATTTTATGTGCAATGAAATTTGGGATAAAGAGATGCAAACCTCAGGTGGATATGTGTGAATTCTGTCTGAATCCTTATTCTGTCGAAGACTCCCATTGCAGTTCCTGCCATCAAACGTTTCCGTCAAATAATGGATTTAATTTTTCTAAACATGCATTTCAATGTGGGGGCAAGTTATCCAAAGATATATGTATTATGGAACATTCTCTTCCCCTGAGGACAAGATTGCTTAAAGTCTTGCTGTCATATATGGAGGCATCTGTTCTCTCTGAAGCATTTGGAACAATTTGGACAACGGACTTTAGGAAGCGTTGGGGTGTGAAGCTGAGTAAATCATCATCTGTTGAGGAACTCTTACAGATGTTGACCCTATTTGAAAGAGCACTAAGGCGAGATTTTCTGTCATCAAACTTCTCTACAACAGATGAATTGCTGGGATCAAGCAGCTTGTCAGAAAGTGCTGCACACGTGTTTCCTGATCCTGAATCCATTGCTCTACTTCCATGGGTTCCACAAACCACTGCAGCACTGTCTCTCAGACTTTTTGAGTTCGATTCATCCATCAGCTACGTAAAGCTTGAGAGAATCGAGCCTTGTGAGGAGAAAGAAGAGAGAGAATACATTAGGCTACCATCAAGATATACTCCCTTCAAGTCTAATAGGGAGGTTGAGCCAGCAGCTCTTGATCATGATGGATTCCTCAAAGTTAAATCGTCTGCTAATAAAATTGTACGGAGTGGTAATAAGCGTGGACGAGGGGCTAGTGATCATGGGCGGGGTAAAAAGCTGGCTAAAAGAATGTACAATTCAAAACGAGATACTGGCCGTCGAAATGTTAAGGTCACCGAGAGTCTGAGTCAGAAATTAAAACAGCAGGGACGGGGAACACAAGGACAAGGGGGTGGGCGAGGTCGCCGAACGGTCCGGAAACGTAGAGTAGAAAAGAGAGCCGTTGAAGATTTGTTACTGGGCCATGCAGCAGCAAGTCATAGCCCCAAGAGTGATAGAGAACCATTGAGAAGCTTGGATGAAGAATGGGATGTCGAAAAGGCAAGTCCCATGACTCCTGTTCATATTGGGGTTGCTGAAAATAGTAACAGTGCTGAAGAGGTGGAATCTGATGATAATGGTCAGGCAGTGGAATATGATCATGGAAACTGGGAGATAGGTTATAATGGTGTCTCTCCTAACAATTGGAATAGGGATTTGgttggaatgagcgatgatgatgtggacacctttgaagatgacaatgacaatgataatgataataacattggcgttggcattgaagataatgaagaggaagattccgacgacgatgttatgagtgaaggttcggacggcatggCAAATAGAATAGTGAATGTAGGAGGAGGCTCAGATTCTGAAGATTCTTCTGATTAG 5328 0.3979 MDVEAENNTQKGDDGGENSNENNNNNNNMNNNGSNSKIMSSSEGQSKPKRQMKTPFQLETLEKAYALENYPSEVTRVELSEKLGLSDRQLQMWFCHRRLKDKKELPPKKPRKAPPLPDSPTDELNPKLAIEPVNEYGSGSGSGSSPIARPELRSVVPTRTYYESPQTIIELRAIACVEAQLGEPLREDGPILGTEFDPLPPDAFGAPLAVAEQQKRPSLPYDSKIYERHEVRTNKAVARTFPEYTFVPSQSSIRSDTFGQLSQPHLYDSMEGPTRTPPFPIGNEHLPRVHASQNHSSRARLLSQQDKPVIPYTSPPHLLSQQDKQLIPYPSPPRDNDVVPKREPHTNIANTSMNTQFSDHLIVGQENSLALGLPGGQVLHNDAVLRVEKKRKSDDARVAKEVEAYEIRMKKELEKQDILRKKNEERMKKEMERQDRERRKEEERLMRERQREEERLKREHRRELERREKYLIKEHLRAEKRKQKEEIRKEREAERRKAALEKANARRIAKESMELIEDEQLELMELAAASKGLSSIIHIDLDTLQNLESFRDSLCIFPPKSVKLRKPFAIQPWINSEQNVGNLLMVWRFLITFADVLELWPFTLDEFVQAFHDYDTRLLGEIHVALLKVVIKDIEDVARTPSGLGLNQNGAANPAGGHPEIVEGAYTWGFDIRNWQKNLNQLTWPEILRQLALSAGFGPQLKKRSVTWSIANDKDEGRSCEDVISTLRNVAKMREKGLLAPRKSRHRLTPGTVKFAAFHVLSLEGSKGLNVLDLAEKIQKSGLRDLTTSKTPEASISVALTRDAKLFERIAPSTYRVRTAFRKDPADAVSILSEARKKIQIFENGFLAGEDADDVEREEESESDGVDEDPEDDDLMNPSGGNQVSEQYDDMNICSVNVKENLGHDVDLILNELDTDLPCFPENGSKDADCPSSVTRQPAACENLNTGNLDDDNMEIDETKSGESWVQGLTEGEYSDLKRLNALVALVGVANEGNSIRIVLEDRLEAANALKKQMWAEAQIDKVRLKDDYISKLDFPSLTGNKFETQDTYLAVEGNQSPMLNMNINNIKNEASPSTAENQKEAPGAQNLLIERPSAVQDFCTGTGPDNFQAQVPAQYSKRSRSQLKSYISHIAEEMYVYRSLPLGQDRRRNRYWQFVASASSNDPGSGRIFVEHHDGSWMLIDSEEAFDILLTSLDSRGIRESHLRLMLQKIEKSFKENVRKNTQYAKVGSIGEVSIKTEAKETYPKPEHHSRSDSPSSTLHDLHPDASETSSSFKIEIGKSENEKKAALKRYQDFQKWMWKECYSSSILCAMKFGIKRCKPQVDMCEFCLNPYSVEDSHCSSCHQTFPSNNGFNFSKHAFQCGGKLSKDICIMEHSLPLRTRLLKVLLSYMEASVLSEAFGTIWTTDFRKRWGVKLSKSSSVEELLQMLTLFERALRRDFLSSNFSTTDELLGSSSLSESAAHVFPDPESIALLPWVPQTTAALSLRLFEFDSSISYVKLERIEPCEEKEEREYIRLPSRYTPFKSNREVEPAALDHDGFLKVKSSANKIVRSGNKRGRGASDHGRGKKLAKRMYNSKRDTGRRNVKVTESLSQKLKQQGRGTQGQGGGRGRRTVRKRRVEKRAVEDLLLGHAAASHSPKSDREPLRSLDEEWDVEKASPMTPVHIGVAENSNSAEEVESDDNGQAVEYDHGNWEIGYNGVSPNNWNRDLVGMSDDDVDTFEDDNDNDNDNNIGVGIEDNEEEDSDDDVMSEGSDGMANRIVNVGGGSDSEDSSD 1775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00351 1775 MobiDBLite consensus disorder prediction 1711 1775 - -
Car01g00351 1775 MobiDBLite consensus disorder prediction 1 57 - -
Car01g00351 1775 MobiDBLite consensus disorder prediction 1238 1276 - -
Car01g00351 1775 MobiDBLite consensus disorder prediction 1587 1605 - -
Car01g00351 1775 MobiDBLite consensus disorder prediction 1716 1751 - -
Car01g00351 1775 ProSiteProfiles 'Homeobox' domain profile. 44 104 IPR001356 GO:0003677
Car01g00351 1775 MobiDBLite consensus disorder prediction 850 887 - -
Car01g00351 1775 ProSiteProfiles DDT domain profile. 577 636 IPR018501 -
Car01g00351 1775 MobiDBLite consensus disorder prediction 12 53 - -
Car01g00351 1775 CDD homeodomain 49 104 IPR001356 GO:0003677
Car01g00351 1775 MobiDBLite consensus disorder prediction 852 875 - -
Car01g00351 1775 MobiDBLite consensus disorder prediction 1556 1586 - -
Car01g00351 1775 Gene3D - 31 105 - -
Car01g00351 1775 Coils Coil 473 504 - -
Car01g00351 1775 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 1139 1211 IPR028941 -
Car01g00351 1775 SUPERFAMILY Homeodomain-like 33 103 IPR009057 -
Car01g00351 1775 MobiDBLite consensus disorder prediction 1552 1647 - -
Car01g00351 1775 ProSiteProfiles HARE-type HTH domain profile. 751 820 IPR007759 GO:0006355
Car01g00351 1775 SMART HOX_1 46 108 IPR001356 GO:0003677
Car01g00351 1775 Pfam HB1, ASXL, restriction endonuclease HTH domain 751 819 IPR007759 GO:0006355
Car01g00351 1775 Pfam Homeodomain 47 103 IPR001356 GO:0003677
Car01g00351 1775 Coils Coil 402 467 - -
Car01g00351 1775 MobiDBLite consensus disorder prediction 1239 1259 - -
Car01g00351 1775 MobiDBLite consensus disorder prediction 101 126 - -
Car01g00351 1775 Pfam DDT domain 579 633 IPR018501 -
Car01g00351 1775 MobiDBLite consensus disorder prediction 1260 1276 - -
Car01g00351 1775 PANTHER HOMEOBOX DOMAIN PROTEIN 16 1775 - -
Car01g00351 1775 SMART testlast3 577 636 IPR018501 -
Car01g00351 1775 MobiDBLite consensus disorder prediction 424 460 - -
Car01g00351 1775 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 16 1775 IPR044977 GO:0006357
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00351 Car-Chr1 2736174 2744705 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00351 40 1699 Homeobox Transcription Factor Family AT1G28420 48.326 0.0 1300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Car01g00351 WSD 6.5e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00351 - - gmx:100777465 2414.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g00351 01 2736174 2744705 Car01g00351 01 2736174 2744705 ECH
Car06g01618 06 15961662 15971891 Car01g00351 01 2736174 2744705 PCT