Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00349 ATGGGGGTGGATTACTATAAGATTTTGAACGTTGACAAGAATGCGACAGATGAAGAGTTGAAGAAAGCATATAGAAAGCTTGCCATGAAATGGCACCCTGATAAGAACCCCAACAATAAGAAAGAAGCTGAGACCAAATTCAAACAGATTTCCGAAGCCTACGAGGTTCTAAGTGATCCACAAAAGAGAGCAATATATGATCAATATGGAGAAGAAGGGCTTAAAGGGCAAGTGCCACCACCTTCAGATGCTGGTGGTGCTTCATTCTTCCAAAGTGGAGATGGCCCAACAACATTTAGGTTCAATCCAAGAAACGCCGACGAAATCTTTGCCGAGTTTTTCGGGTTTTCGAGCCCATTTGGAGGTGGAAGTGGAATGAAAGGTGGGTCTAGATCCTTTGGTGGAATGTTTGGTGATAATGTATTTTCTTCATTTGATGAAGGTCATAGGTCTATGCGTCAAGGTCCTCGCAAGGCACCTCCTATTGAAAATGCATTGCCTTGTAGCCTTGAGGATCTTTATAAAGGGACCACTAAAAAGATGAAGATCTCAAGGCAAATTGCAGATGCAAGTGGGAAAACTTTACCTGTGGAGGAAATCCTAACAATTGAAATCAAACCAGGATGGAAAAAGGGGACAAAAATCACATTCCCTGAGAAAGGAAATGAACAGCCAAATGTGATAGCATCAGATCTTACATTCATTATTGATGAGAAACCACACACTGTATTCACAAGAGACGGTAACGATCTAGTTGCAACGCAGAAGATATCGCTAGCAGAAGCTTTAACAGGCTACACCGTTCGACTCACAACACTAGATGGCAGAGTTCTTACCATTCCTATAAACAATGTGATTCATCCAAACTATGAAGAAGTTGTTCCAAGGGAAGGTATGCCAATTCCAAAAGATCCTTCAAAGAAGGGCAATCTTAGAATCAAATTCAACATCAAGTTTCCAACAAGGTTGACATCAGAACAGAAAGTTGGAATCAAGAAACTTCTGGCTCCATAG 1014 0.4122 MGVDYYKILNVDKNATDEELKKAYRKLAMKWHPDKNPNNKKEAETKFKQISEAYEVLSDPQKRAIYDQYGEEGLKGQVPPPSDAGGASFFQSGDGPTTFRFNPRNADEIFAEFFGFSSPFGGGSGMKGGSRSFGGMFGDNVFSSFDEGHRSMRQGPRKAPPIENALPCSLEDLYKGTTKKMKISRQIADASGKTLPVEEILTIEIKPGWKKGTKITFPEKGNEQPNVIASDLTFIIDEKPHTVFTRDGNDLVATQKISLAEALTGYTVRLTTLDGRVLTIPINNVIHPNYEEVVPREGMPIPKDPSKKGNLRIKFNIKFPTRLTSEQKVGIKKLLAP 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00349 337 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Car01g00349 337 PANTHER DNAJ HOMOLOG SUBFAMILY B MEMBER 13-LIKE 1 336 - -
Car01g00349 337 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 336 - -
Car01g00349 337 CDD DnaJ 4 59 IPR001623 -
Car01g00349 337 SUPERFAMILY HSP40/DnaJ peptide-binding domain 156 248 IPR008971 GO:0006457|GO:0051082
Car01g00349 337 Gene3D - 241 321 - -
Car01g00349 337 SUPERFAMILY Chaperone J-domain 3 99 IPR036869 -
Car01g00349 337 Gene3D - 161 239 - -
Car01g00349 337 Pfam DnaJ C terminal domain 163 320 IPR002939 -
Car01g00349 337 PRINTS DnaJ domain signature 6 24 IPR001623 -
Car01g00349 337 PRINTS DnaJ domain signature 24 39 IPR001623 -
Car01g00349 337 PRINTS DnaJ domain signature 42 62 IPR001623 -
Car01g00349 337 PRINTS DnaJ domain signature 62 81 IPR001623 -
Car01g00349 337 Gene3D DnaJ domain 3 149 IPR036869 -
Car01g00349 337 CDD DnaJ_C 160 323 - -
Car01g00349 337 SUPERFAMILY HSP40/DnaJ peptide-binding domain 243 328 IPR008971 GO:0006457|GO:0051082
Car01g00349 337 Pfam DnaJ domain 4 67 IPR001623 -
Car01g00349 337 SMART dnaj_3 3 62 IPR001623 -
Car01g00349 337 MobiDBLite consensus disorder prediction 72 97 - -
Car01g00349 337 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00349 Car-Chr1 2729469 2732128 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00349 5 69 C2H2 Transcription Factor Family AT1G74250 39.130 3.07e-10 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00349 K09510 - tcc:18596788 561.222
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g00349 01 2729469 2732128 Car01g00349 01 2729469 2732128 ECH