Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00323 ATGGGTGGAACCTCCTTCTCCTTGGCCGGTAAAGTTACTACTATGTTTCTGGCGACTCGCCTTCAGGATACTATTGAGTTTGTTTCAGACACTAGTAGTACTATTGCTGATGTTGAGTTTCAATTTCTTGATGATGATGATGAGGTATTATCTTGTCAAAGTTCTAGTAGTGATGATCAGTGTCATTCCCTTCAAATGGATTTCgatgatgatgatgatgaagaAAAGGATCAAACTCATACCAATGAGGAGATGAATCGAAGGTTTTGGGTCACCCAACATCAGTGTTTGCAGACCAATTTATACAGAACAAGTTCTTTGGAGACAAACATAAGAAGTGCGACCAAAAAAGCGATTAAGGAAATAGAAAGCTTAGGAACAACAGTGTGTGGTTGTAGCAAAGTGATGGGTGCATCCACTTGTCGAAACTGCTTAATGAGGGAAGTTTCTAGAAGACTTCAAAAAGCTGGTTTTGATAGTGCTATTTGTAAAACTAAATGGAGAAACTCACACCATCTTCCATCAGGGGAACACACATTTTTGGATGTGATAGACAATACAAATCCAAAGAAAGGGAATGTAAGAGTGATGATAGAGTTGAACTTCCAAGCTGAGTTTGAAATGGCAAGAGGAAGTGAGGAATACAATCAACTTGTGAAGAAGCTACCAGAGGTGTTTGTTGGGAAAGTTGAGAGATTAAGTAACTTAATCAAAATTTTATGCATGGCAGCCAAAAAATGCATGAAGGATAAAAAAATGCACATGGGGCCATGGAGGAAGCATAGGTACATGCAAGCTAAATGGTTAGGTCCATTTGAAAGGAACACTTCAACAATTCCTCTTTCAATGGGATATTCAAATGAGAAGATCATAACAAAGCCAAAATATAAGGCATCTATGTTGACCGTTGACTTATTAGAGAAGCTTCCAAACATGCATTGCAAAGCTGTTGAGTCATTTGATTTTCTCTCCCCTTCGGTGAAAGCCTTGAAACCCTTCAGGCTTTTACGGAAGGTGGGAATTTTGACTAGAAAGGGGGTGGTTACTGTTTTGATTACGCAAGAGTTGAAGGAAAGGAATTTTCTTTTAGGAAGAAAAAAAAAGGTTATGATGGAGGATGATACCAATTCATGGATAAGGAGAACAAAATTTTCTCACACAGTGTGTCATCGTTTGGATACAACTAGATTAAGTTCTATTCCAATCAACACTCAATCAGACCAAAATTCAAGACTTTTTTCAAATGTTAAGAGAAACCCTATAACCAATAAGCAGAGATCTTTGTCACCATTGCCTCAAACTTTTATTTCTGAGGTGTTTAGGGAAGCTAGACATGATCAGAAGAGGTTTTCAACACCAGGCCCTAGGAGGGATAAGAGAATTATGGGGAAGTTGTCAAACAAGGATTCTCGGGAAGTCAATGTATCGAGTTTGAAATCTACTATCATTAGTCCTAATAGGCAAAGGAATGCCAAGAACAGCAAGGATGTTTCGTGGAGTAAGTATTTTGAAAATGGTGGTGGCGGCAGTGGTGGAAAGGTTACTGCTTTGGAGACGGCTGAGGAATGGACTATTGACATGTCTAAGCTGTTTCTTGGCCATAAGTTCGCTCATGGCGCTCATAGTAGGCTTTACCATGGTGTATATAAAGATGAAACTGTAGCTGTTAAAATCATTAGGGTACCTGACGATGATGATAATGGAGACATGGCTTCTCGATTAGAGAATCAGTTCATTAGAGAAGTCACACTTTTATCTCGCCTCCATCATCGAAATGTTATAAAGTTCATAGCTGCAAGCAGAAATCCACCGGTTTATTGTATCATCACCGAATATCTATCGGAAGGTTCCTTGAGGGCATATTTGCATAAGTTGGAGCACAAAGCTGTTTCTACAGAGAAGCTAATAGCTTTCGCTTTGGATATTTCTCGTGGAATGGAATATATACACTCTCAAGGTGTCATTCATAGAGATCTTAAACCGGAGAATGTCCTTATTGATACAGACTCTCACCTCAAAATTGCCGATTTCGGCATTGCTTGTGAGGAGGCAGTATGTGACTTATTGGCTGACGATCCAGGCACCTACCGTTGGATGGCACCTGAAATGATCAAACGGAAAGCCTACGGGAGAAAGGTTGACGTCTACAGTTTTGGGCTTATGTTATGGGAAATGTTGACCGGAACAATTCCATATGAGGAAATGACTCCAATCCAGGCTGCTTTTGCGGTTGTGAACAAGAAATTAAGGCCGGTAATTCCTTCAGACTGTCCACCTGCAATGCGAGCTTTAATCGAGCAATGTTGGTCGTTACAACCAGATAAGAGAACCCTCGTTGCCAAGATCAAAAGAAAGGGCTTCGTCATTGGATTCAAAAGCTTGGTCCCGCGTCTCCAAATAGTGGCCCTGTGCTTAAACCCAAATTCACATGAATATTTTAGTGTCCTGGCATTTCTAGTAAACCAGATAATAAACCCCTTCATTAAAATAATGTTTCAAATTCAGAAAATTCATTGA 2517 0.3957 MGGTSFSLAGKVTTMFLATRLQDTIEFVSDTSSTIADVEFQFLDDDDEVLSCQSSSSDDQCHSLQMDFDDDDDEEKDQTHTNEEMNRRFWVTQHQCLQTNLYRTSSLETNIRSATKKAIKEIESLGTTVCGCSKVMGASTCRNCLMREVSRRLQKAGFDSAICKTKWRNSHHLPSGEHTFLDVIDNTNPKKGNVRVMIELNFQAEFEMARGSEEYNQLVKKLPEVFVGKVERLSNLIKILCMAAKKCMKDKKMHMGPWRKHRYMQAKWLGPFERNTSTIPLSMGYSNEKIITKPKYKASMLTVDLLEKLPNMHCKAVESFDFLSPSVKALKPFRLLRKVGILTRKGVVTVLITQELKERNFLLGRKKKVMMEDDTNSWIRRTKFSHTVCHRLDTTRLSSIPINTQSDQNSRLFSNVKRNPITNKQRSLSPLPQTFISEVFREARHDQKRFSTPGPRRDKRIMGKLSNKDSREVNVSSLKSTIISPNRQRNAKNSKDVSWSKYFENGGGGSGGKVTALETAEEWTIDMSKLFLGHKFAHGAHSRLYHGVYKDETVAVKIIRVPDDDDNGDMASRLENQFIREVTLLSRLHHRNVIKFIAASRNPPVYCIITEYLSEGSLRAYLHKLEHKAVSTEKLIAFALDISRGMEYIHSQGVIHRDLKPENVLIDTDSHLKIADFGIACEEAVCDLLADDPGTYRWMAPEMIKRKAYGRKVDVYSFGLMLWEMLTGTIPYEEMTPIQAAFAVVNKKLRPVIPSDCPPAMRALIEQCWSLQPDKRTLVAKIKRKGFVIGFKSLVPRLQIVALCLNPNSHEYFSVLAFLVNQIINPFIKIMFQIQKIH 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00323 838 ProSiteProfiles Protein kinase domain profile. 530 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g00323 838 Gene3D Transferase(Phosphotransferase) domain 1 615 788 - -
Car01g00323 838 Gene3D Phosphorylase Kinase; domain 1 518 614 - -
Car01g00323 838 PANTHER TYROSINE KINASE FAMILY PROTEIN 373 777 - -
Car01g00323 838 SMART serkin_6 530 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g00323 838 Pfam Protein tyrosine and serine/threonine kinase 532 783 IPR001245 GO:0004672|GO:0006468
Car01g00323 838 SUPERFAMILY Protein kinase-like (PK-like) 516 784 IPR011009 -
Car01g00323 838 CDD STKc_MAP3K-like 537 776 - -
Car01g00323 838 ProSitePatterns Serine/Threonine protein kinases active-site signature. 654 666 IPR008271 GO:0004672|GO:0006468
Car01g00323 838 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 373 777 - -
Car01g00323 838 Pfam PDDEXK-like family of unknown function 39 274 IPR006502 -
Car01g00323 838 PRINTS Tyrosine kinase catalytic domain signature 757 779 IPR001245 GO:0004672|GO:0006468
Car01g00323 838 PRINTS Tyrosine kinase catalytic domain signature 610 623 IPR001245 GO:0004672|GO:0006468
Car01g00323 838 PRINTS Tyrosine kinase catalytic domain signature 648 666 IPR001245 GO:0004672|GO:0006468
Car01g00323 838 PRINTS Tyrosine kinase catalytic domain signature 713 735 IPR001245 GO:0004672|GO:0006468
Car01g00323 838 PRINTS Tyrosine kinase catalytic domain signature 694 704 IPR001245 GO:0004672|GO:0006468
Car01g00323 838 TIGRFAM A_thal_3542: uncharacterized plant-specific domain TIGR01615 147 275 IPR006502 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00323 Car-Chr1 2449717 2463253 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00323 371 776 MAP Kinase Kinase Kinase AT5G58950 55.361 1.02e-174 513
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Car01g00323 PK_Tyr_Ser-Thr 2.1e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00323 - - gmx:100500590 658.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01581 06 15583798 15586822 Car01g00323 01 2449717 2463253 PCT