Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00280 ATGGGGTTTTCGAATTTTGAGTTGCATGTGCAAATCTATGTCATTTCCATGGTGATTTTCATTGGAACTTTCTGTGTTGGAGACACTGACCCTGTTGATGTTgcagcaatcaatcgtctatatgttgctatggactcaccacctcttGAAGGGTGGAAGCCTGAGGGAGGGGATCCATGTTTAGAACTTTGGCAAGGTGTGGATTGTGTCTTCTCCAACATAACTGCCATACGACTAGGCGGTATGAATTTAGGTGGAGAGCTTGGCAGTAGTTTGGATTTCCCATCCATTATAGCAATTGATCTTAGCAACAACCACATCGGAGGTGCCATTCCATTCACTTTACCCCCTACTCTGAGGACCTTGTCTCTGTCAGGAAATCGGTTAAATGGAAGTATTCCAGATGCCTTATCCTTATTAACACAATTGTCGAACTTGGATTTGGCCAGTAACAACTTGAGCGGTCCGCTGCCATCCTCAATAGGGAGTTTAACGTCTCTTACAACATTAAACTTGCAGAACAATACACTTTCAGGGACCCTTTTTGTTTTGCAGGACCTTGCTCTTCATGATTTGGATATAGAGAATAATTTATTCTCTGGACCAGTTCCTCCAAATTTGCTGAGCATCCCTAATTTCAGAAAAGATGGAAATCCATTTAATACTACTATTATTCCATCACCGCCTGCTGCGGCCCCTTCACCTGTAGCTATGAGTCCATTCCCTGGAGAATCACCTTGGAGTGTGGCATATAGTCCTGCCCTGACAACAGTGAAGCCTACAAGTGGTTCTGCTAAGTCTTTTCTTGCTAAGCACGCCATTTTGATTGCTGTTGCCGGTCTTGTAGTATTTATTGCTTTGGGAATTTGTCTTTTTATGATGTGGTGCTGTAAGAGAGAGCCAGAAAATAAAAAATCTCAGAATCTTGACGTGGAGGGTTTTCCAATGACATTGCATAAACCTACGCGCAATGACACTACTTTTGGAGCAACTAATCAAGATGGAAAAGTTGAGAAAGCATCACGTTTAAATGAAGTACCAAATAGAATTACGAACATGATTCCAAAGGTTCAAGATGAACTAGTATATATCAACACAGTATCTGCAACTTCAGAACCCAATGATGGTTCCAAACCTTCAACCTTGCAGCCACCACCACATTCTCTGTCGAGCATTCCTGGTGCAAAGGTCATCGCCAATCCAGCTGTAACCACCAAAGGTACTGAAAGACAAGCTATGGCAAGTTCCATCAAAATGTATACTGTTGCATCACTTCAGCAATATACAAATAGCTTTTCTGACGAAAACCGTATCGGGGAAGGCACTCTTGGATCGGTATATAGGGCTGAACTCCCTGATGGAAAGCTGTTAGCAGTGAAGAAACTGGATGCTACTGCTTTCAAGGACCAGAATGATGAACAGTTTCTTCAATTGGTATCCAGCATCTCCAAAATTCAGCATGCCAATATTGCAAAGCTTGTGGGATATTGTGCCGAGTATAACCAACGATTACTTATATACGAATATTGTAGTAATGGGACCCTACATGATACACTGCATGGTGATGACGAACATTGTACTAAATTTCCTTGGAATGCACGCATTAAGGTGGCACTTGGAGCTGCAAGGGCTTTAGAGTATCTGCATGAGAATTTTCGGCCACCGATTGTGCACCGAAACTTTAGATCTGCTAATGTTCTCCTGAATGAAAAGTTGGAAGTGTGTGTCTCTGATTGTGGATTAGGTCATTTGCTATCTTCTGGCACTGTTGGTCAGTTATCTGGACGCCTCCTCACAGCTTACGGTTACAGCGCTCCAGAATTCGAGTCTGGAAGTTATACACAGCAAAGCGATGTCTTCAGTTTTGGAGTCGTAATGCTAGAACTCCTCACTGGAAGAAAATCCTACGACAAGTCACGGCCTCGTGCTGAACAGTTTTTGGTCAGATGGGCAGTCCCTCAACTCCATGACATTGATGCATTGTCAAAAATGGTTGACCCCCGCTTAAATGGATCCTATTCTATGAAGTCGTTGTCACGTTTTGCAGATATTGTTTCTTCATGTATTCAGCGTGAACCCGAATTCCGACCAGCCATGTCTGAAATTGTCCAGGATCTCTTGCTAACAATGTAA 2133 0.4191 MGFSNFELHVQIYVISMVIFIGTFCVGDTDPVDVAAINRLYVAMDSPPLEGWKPEGGDPCLELWQGVDCVFSNITAIRLGGMNLGGELGSSLDFPSIIAIDLSNNHIGGAIPFTLPPTLRTLSLSGNRLNGSIPDALSLLTQLSNLDLASNNLSGPLPSSIGSLTSLTTLNLQNNTLSGTLFVLQDLALHDLDIENNLFSGPVPPNLLSIPNFRKDGNPFNTTIIPSPPAAAPSPVAMSPFPGESPWSVAYSPALTTVKPTSGSAKSFLAKHAILIAVAGLVVFIALGICLFMMWCCKREPENKKSQNLDVEGFPMTLHKPTRNDTTFGATNQDGKVEKASRLNEVPNRITNMIPKVQDELVYINTVSATSEPNDGSKPSTLQPPPHSLSSIPGAKVIANPAVTTKGTERQAMASSIKMYTVASLQQYTNSFSDENRIGEGTLGSVYRAELPDGKLLAVKKLDATAFKDQNDEQFLQLVSSISKIQHANIAKLVGYCAEYNQRLLIYEYCSNGTLHDTLHGDDEHCTKFPWNARIKVALGAARALEYLHENFRPPIVHRNFRSANVLLNEKLEVCVSDCGLGHLLSSGTVGQLSGRLLTAYGYSAPEFESGSYTQQSDVFSFGVVMLELLTGRKSYDKSRPRAEQFLVRWAVPQLHDIDALSKMVDPRLNGSYSMKSLSRFADIVSSCIQREPEFRPAMSEIVQDLLLTM 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00280 710 MobiDBLite consensus disorder prediction 369 395 - -
Car01g00280 710 Gene3D Phosphorylase Kinase; domain 1 395 509 - -
Car01g00280 710 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 3-LIKE ISOFORM X1 140 707 - -
Car01g00280 710 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 3-LIKE ISOFORM X1 9 146 - -
Car01g00280 710 PANTHER LEUCINE RICH REPEAT KINASE 2 9 146 - -
Car01g00280 710 PANTHER LEUCINE RICH REPEAT KINASE 2 140 707 - -
Car01g00280 710 Gene3D Transferase(Phosphotransferase) domain 1 510 708 - -
Car01g00280 710 Gene3D Ribonuclease Inhibitor 35 230 IPR032675 -
Car01g00280 710 SUPERFAMILY L domain-like 46 212 - -
Car01g00280 710 Pfam Protein tyrosine and serine/threonine kinase 435 706 IPR001245 GO:0004672|GO:0006468
Car01g00280 710 ProSiteProfiles Leucine-rich repeat profile. 118 140 IPR001611 GO:0005515
Car01g00280 710 MobiDBLite consensus disorder prediction 369 388 - -
Car01g00280 710 SUPERFAMILY Protein kinase-like (PK-like) 413 707 IPR011009 -
Car01g00280 710 ProSiteProfiles Protein kinase domain profile. 432 708 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00280 Car-Chr1 2122240 2129897 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00280 19 707 Strubbelig Receptor Gene Family AT4G03390 49.328 0.0 635
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Car01g00280 PK_Tyr_Ser-Thr 3.5e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00280 - - gmx:100804771 966.066