Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00256 ATGATGTTTAATCATGGACTTTTCTTTTTTGCTATTGAACAGGTTAGTGAAGAAGTGGAACGCGCTTTAGCAAAATTAGGCCCTGCCAATTTTAGTGAGAGATCTTCTCCCAAGCGCATAGAAGGCCCTGATGGAAGAAATTTACAGTTACAATTCAGGACCAGGTTATCCCTTCCCCTCTTTACTGGTGGGAAAGTGGAGGGGGAGCAGGGCACTGCCATACATATTGTTTTGATTGATGCAAACACAGGCCATGTTGTCACATCTGGTCCATCGTCATGTGTCAGACTAGATATTATTGTACTTGAAGGGGATTTCAATAATGAGGATGATGATACTTGGAGTGAAGAAGAATTTGAGAGCCATGTTGTGAAAGAGCGAGAAGGAAAAAGGCCTCTTCTGACTGGTGATCTGCTAGTGACACTGAAGGAGGGTGTAGGAACACTGGGCGATCTTACATTTACAGACAACTCTAGCTGGATAAGGAGTCGGAAGTTCAGACTGGGGCTAAAAGTTTCCTCGGGTTGTTGTGAGGGAATGCGTATTCGTGAAGCCAAAACAGAGGCTTTCACTGTTAAGGATCACCGCGGAGAATTATACAAGAAACACTATCCACCTGCCTTGACTGATGAGGTCTGGAGATTGGAGAAGATTGGCAAGGATGGGTCCTTTCACAAAAGGCTAAATAAAGCAGGAATATGTTCTGTTGAGGATGTCCTTCGACTTGTGGTTAGAGACCCACAAAGATTGCGGAATATTCTCGGGAGTGGCATGTCAAATAAAATGTGGGAGGTTCTCGTTGAGCATGCGAAGACTTGTGTCCTAAGTGGAAAACTCTATGTATACTATCCTGATGATGCAAGGAATGTTGGTGTTGTTTTCAATAATATCTATGAGTTGATTGGCTTAATCACGAATGACCAATACTACTCTGCCGATTCTCTCTCTAATAGTCAAAAGGTTTATGTGGACACATTGGTGAAGAAGGCATATGAGAATTGGATGCATGTTATTGAGTATGATGGCAAGTCTCTGCTAAATTACAATCAGAATAGGAATTTGGGTATGTCCCAACCTCAGGTTCCAGTGGGTTCCCATGATTATTCTATTTCAAACTCACTTGATCAGCAGATCTCTATCCCAAGTTTACCTGTTCCTGTACCTACAGGACAACCTTCAATGGATCCATCTGCAACAGTTGGAGGTTATCATCACGGTACGACTACCGGATTCTCAATCCAACCACATAATTCTAATCTTAATTCTTCTATTCAGTTTGGTAATACTGCATTCCCTCTACAAAACCTGCTGACGAGTGCTTCACACCAATCTCAACTTCCAACAAATGACAATGAGCTGTCACTTGGTCCCCCACAATCAGCCACTCCTGGCTTTCAGACTGTTGGCATTTCAGATCCTACTTACAGAGGATTTGAAGACTTCTTCCCAGAAGAAGATATTCGTATGAGAAGTCATGAGATGCTAGAAAATGAAGATATGCAGCATCTGCTCCGTATTTTTAATATGGGAGGGCAATCTCATTCTTCCTTTAATGCTCCTGAAGATGGATATCCTTATTCATCTCCTTACATGCCTGCAACCTCCATCAACTACAACATGGACGATGAGCGAAACCGTTCCTCGGGAAAGGCTGTTGTGGGATGGCTCAAGCTTAAGGCAGCTTTGAGATGGGGCATTTTTGTTCGGAAGAAAGCTGCTGAGAGACGGGCACGGCTTGTTGAGCTGGATGAATCATAG 1758 0.4317 MMFNHGLFFFAIEQVSEEVERALAKLGPANFSERSSPKRIEGPDGRNLQLQFRTRLSLPLFTGGKVEGEQGTAIHIVLIDANTGHVVTSGPSSCVRLDIIVLEGDFNNEDDDTWSEEEFESHVVKEREGKRPLLTGDLLVTLKEGVGTLGDLTFTDNSSWIRSRKFRLGLKVSSGCCEGMRIREAKTEAFTVKDHRGELYKKHYPPALTDEVWRLEKIGKDGSFHKRLNKAGICSVEDVLRLVVRDPQRLRNILGSGMSNKMWEVLVEHAKTCVLSGKLYVYYPDDARNVGVVFNNIYELIGLITNDQYYSADSLSNSQKVYVDTLVKKAYENWMHVIEYDGKSLLNYNQNRNLGMSQPQVPVGSHDYSISNSLDQQISIPSLPVPVPTGQPSMDPSATVGGYHHGTTTGFSIQPHNSNLNSSIQFGNTAFPLQNLLTSASHQSQLPTNDNELSLGPPQSATPGFQTVGISDPTYRGFEDFFPEEDIRMRSHEMLENEDMQHLLRIFNMGGQSHSSFNAPEDGYPYSSPYMPATSINYNMDDERNRSSGKAVVGWLKLKAALRWGIFVRKKAAERRARLVELDES 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00256 585 PANTHER OS02G0177800 PROTEIN 15 583 IPR012416 GO:0005516
Car01g00256 585 MobiDBLite consensus disorder prediction 442 463 - -
Car01g00256 585 PANTHER CALMODULIN-BINDING PROTEIN 15 583 - -
Car01g00256 585 Pfam Calmodulin binding protein-like N-terminal domain 48 195 IPR046831 -
Car01g00256 585 Pfam Calmodulin binding protein central domain 208 273 IPR046830 -
Car01g00256 585 Pfam Calmodulin binding protein C-terminal domain 278 340 IPR046829 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00256 Car-Chr1 1921404 1927808 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00256 15 580 Calmodulin-binding Proteins AT5G57580 60.508 0.0 684
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00256 - - gmx:100802994 962.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01521 06 14850649 14855270 Car01g00256 01 1921404 1927808 PCT