Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00249 ATGTCCACTCTCACTTTCTTCGAGCGTCTTTCTAAAACTTTCCATGACCATCGCTCTCATCTTAAGCTTGTACTCCTCTGCTCCGCCGTTAGTGGTGGTGGTATCTTGGCTTACGGTGAGTTGGCTCCATCGGAAGCGGCGGTTACCGATAAGAAAAAGGTGGTGGTGCTGGGAACTGGTTGGGCGGCAACAAGTTTCATGAAGAATTTGAACAATCCGAGATACGAGGTTCAGGTGGTATCGCCTCGTAATTATTTTGCATTCACTCCTCTGTTACCTAGCGTAACTTGCGGCACCGTGGAAGCGCGCAGCATTGTTGAACCCGTTCGCAATATTTTTAGGAAGAAAAAGGTGAACGTGCAATTCAATGAAGCAGAATGTTACAAGATTGATGCGGAAAATAAGAAAATTTATTGTCGATCTAAAGGAAACAATAATTTGAATGGGAAAGAAGAATATGAAGTGGACTATGACTATCTAATCATCGGCGTGGGCGCTACTGTCAATACATTTAACACACCAGGAGTGGTGGAGAATTGTCACTTTTTGAAGGAAGTTGAAGATGCCCAGAAGATTAGAAGAACAGTTATTGACTGTTTTGAGAGAGCAAATTTGCCTGATATAAGTGAGGAAGAAAAGAAGAGAATTCTTCATTTTGCTATTGTTGGAGGTGGACCAACTGGAGTGGAGTTTGCAGCTGCACTTCATGACTTTGTCAAAGATGATTTAGCCCGTTTATATCCTGGAATAAAAGATTTAGTAAAGATTACACTTCTGGAAGCTGGAGGTCATCTCTTGAGCATGTTTGACAAAAGGATAACTGCTTTTGCTGAAGATAAGTTTCAAAGAGAAGGGATTGATGTGAAAACAGGATCCATGGTTGTGAAGGTATCCGAGAAAGAAATTTCCACCAAAGATCTGAAAAATGGAGGAGAAATTAAGACCATTCCATATGGAATGGCTGTCTGGTCAACCGGTATTGGCACTCGTCCATTTATTAGAGATTTTCTGTCCCAGATTGGTCAGGCTAGCAGGCGTGCTGTAGCTACTGATGAATGGTTGAGAGTGGAAGGATGTAACAACGTGTATGCTCTTGGTGATTGCGCTACGATAAATCAACGAAAAGTCATGGAAGATATTGCCGCTATCTTTAAGAAGGCCGACAAAAGCAGTTCAGGAACGCTTACGGTCAAAGAATTTCAAGAGGCCATGCATGACATTTGTGAACGATACCCTCAGGTTGAGCTGTATCTGAAGAGTAAACAGATGCGCAACATTGCTGATTTATTGAGTGAAGCCAAGGGAGATGTTAAAAAAGAACCAATTGAACTGAATATCGAAGAACTCAAAACGGCCCTTTCCAAAGTGGATTCTCAGATGAAATTTCTACCTGCTACAGCACAGGTTGCATCTCAGCAAGGAATTTACCTAGCCAAATGTTTTAACCGGATGGAAGAGTGTGAGAAAAATCCAGAGGGTCCTCTCAGGTTCAGGGGAGAAGGTCGTCATCGGTTCAAACCCTTTAGGTACAAGCACTTAGGTCAGTTCGCTCCTTTGGGAGGAGAGCAGACAGCTGCCCAGCTTCCTGGGGATTGGGTTTCAATTGGTCACAGCAGTCAATGGTTGTGGTATTCTGTCTATGCAAGCAAACAAGTAAGCTGGCGTACAAGGGCACTAGTAGTGACAGACTGGTCAAGACGTTTTATTTTCGGGAGAGATTCAAGCCGCATCTGA 1734 0.4325 MSTLTFFERLSKTFHDHRSHLKLVLLCSAVSGGGILAYGELAPSEAAVTDKKKVVVLGTGWAATSFMKNLNNPRYEVQVVSPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIFRKKKVNVQFNEAECYKIDAENKKIYCRSKGNNNLNGKEEYEVDYDYLIIGVGATVNTFNTPGVVENCHFLKEVEDAQKIRRTVIDCFERANLPDISEEEKKRILHFAIVGGGPTGVEFAAALHDFVKDDLARLYPGIKDLVKITLLEAGGHLLSMFDKRITAFAEDKFQREGIDVKTGSMVVKVSEKEISTKDLKNGGEIKTIPYGMAVWSTGIGTRPFIRDFLSQIGQASRRAVATDEWLRVEGCNNVYALGDCATINQRKVMEDIAAIFKKADKSSSGTLTVKEFQEAMHDICERYPQVELYLKSKQMRNIADLLSEAKGDVKKEPIELNIEELKTALSKVDSQMKFLPATAQVASQQGIYLAKCFNRMEECEKNPEGPLRFRGEGRHRFKPFRYKHLGQFAPLGGEQTAAQLPGDWVSIGHSSQWLWYSVYASKQVSWRTRALVVTDWSRRFIFGRDSSRI 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00249 577 SUPERFAMILY FAD/NAD(P)-binding domain 218 372 IPR036188 -
Car01g00249 577 PANTHER NADH DEHYDROGENASE 3 577 IPR045024 GO:0003954|GO:0006116
Car01g00249 577 SMART efh_1 379 407 IPR002048 GO:0005509
Car01g00249 577 PANTHER NAD(P)H DEHYDROGENASE B2 3 577 - -
Car01g00249 577 SUPERFAMILY EF-hand 368 464 IPR011992 -
Car01g00249 577 Pfam Pyridine nucleotide-disulphide oxidoreductase 52 378 IPR023753 GO:0016491
Car01g00249 577 ProSiteProfiles EF-hand calcium-binding domain profile. 375 410 IPR002048 GO:0005509
Car01g00249 577 SUPERFAMILY FAD/NAD(P)-binding domain 51 270 IPR036188 -
Car01g00249 577 Gene3D - 424 576 - -
Car01g00249 577 Gene3D - 44 423 - -
Car01g00249 577 ProSitePatterns EF-hand calcium-binding domain. 388 400 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00249 Car-Chr1 1866045 1871834 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00249 1 577 Chloroplast and Mitochondria Gene Families AT4G21490 71.870 0.0 864
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00249 K03885 - gmx:100802661 1039.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01503 06 14650685 14656759 Car01g00249 01 1866045 1871834 PCT