Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00244 ATGGGGAAAAAATCAACGAAGGAGGATGTGAAAGTAGAATGTCCACCGGACAACCTCCGGTGCAGCCGTACCGACGGACGGCAATGGCGGTGCCGGAGACCAGCGATGGAAAACGTGAAGCTTTGCGAGATTCACTATCTTCAAGGTCGTCATCGTCAGAACAAAGAGAAGGTTCCAGAGTCACTGAAACTACagaggaacatgaagatgaagaagaagaagaagaggaagaacaaaaacgacgtcgtggagattaggtcaaagaagaaaaagaagaagaagGATATTGATGTGCAATTGGAGCTGATAAAAATGGTTCTTCAAAGAGAAATTGAGAAGAAGAAGAAAAATGTGAATTGGAACAACAATGAGGAATCAGAATTGGATTACAGTGAAGGAGAATTGAGGAAAGAATTACCCAATGGGGTTATGGAAATTGCTCCTGTTTCAACACCTCGTGATATTGATTTTCACTGTCATGTTACACCACGTTACTTCAGGTCCAAGAATGTTGATAGAAGGGTCCCTTTTGATAATTTGCAGGATGTTTCAAACTTGAAGAAGGGTAGGAGGAAGAAGTGTCATTGGTGCCAGAGTAGTGATTCATGGAATCTGATAAAATGTTCAAACTGCCAGAAACAGTTTTTCTGCATGGATTGCATTAAAGAACGGTATTTTGATACTCAAGATGAGGTTAAGATGGCGTGTCCGGTTTGTCGAGGAACTTGCACATGTAAAGATTGTTGGACAAGTCATGGTAAAGACAGTGAAAGTAAGGATTATTTGGCTGGTACTAGCAGAGTTGATAGGATATTGCATTTTCATTATATGATATGTATTCTCCTTCCTGTACTAAAACAAATGAGTGAAGACCAGCATACAGAGCTCGAAACAGAAGCGGAAATTAAAGGGAAAAATATTTCTGATATTCTCATCAAGCAGGTCGAATTTGACTGCAAAGAGAAAAATTACTGCAACTACTGCAAAACACCGATTCTGAATCTTCACAGAAGCTGCCTTTGTTGTTCCTACAGCCTTTGCTTAAGATGTTGTCAGGCAATAAGTCATGGAAGCATCTTTGACCATATAAATTCTTCGATGGCCAAGTTACCTGACAAAATGGACACTTGTGTTGCTAATGAAACTCACCTTTTGGATGATATGACCATTTCTAGTAACAATGTAATCGATACTTCAATGTTACATGATTCGACCGGTTGTAATGGTACTAACAATGTATCATGCCCTCCTACCGAGCTAGGTGGCTGTGGTGATGGCCACCTTGATTTGAGATGTGTTTTTTCCTTAAGTTGGATCGAAGAAATGGAAGTAAAGGCTGAAGAAATTGTTTGCAGCTACGACGTTCCTGAAATTTTGGATAAAAATTCAAGTTGCTCACTTTGTATCGACGACGGTGATAGAACTAACAGATATAAGCAATCGCAAGAAGCGGCTCGAAGAGAAGATTCTAATGATAATTGCTTATTTCATCCAACAGTTTTTGACATTCGTAGCGATCATTTTGAACACTTTCAGAAACACTGGGGAAAAGGCCATCCTGTAATAGTGCAAAATGTGCTCCGAAGTACGACACACCTCAGCTGGGATCCTCTGGTCATGTTCTGTGCATATGTTGAGAGGAGCATTACAAGATATGAGAATAATAAGGACTTACTTGAAGCTTGTTTGGATTGGTGGGAGGTGGAAATTAACATTAGACAGCATTTTACTGGTTCTTTTAGATGTCAACCTCAGAAAAATGATTGGCACGAGACGCTGAACCTAAATGGATGGTTATCTTCCCAACTATTCAAAGAACACTTTCCATCTCATTTTGCTGAAGTAATTGGTTCTCTTCCAATTCAAGAATACATGAATCCCAGGTCTGGTCTTCTGAATATAGCTGCACATATGCCAGAGGGGAGTGCTAAACATGACAAAGGCCCATATGTCTATATTTCTCATCGATGTGCTGACAAAGAAGCTTATTCCGTGTTAAATCTCTCTTATCACCCATACGATGTGGTTAATATGATGGCACATACCACAGACGTTCCTCCCTCTACCGAACATCTTACTAAAATAACTAAGTTATTGAAAAAGCACAGAACTATGTGTCAAAGAGGGTCTTCGAAGATTACTACTGAGCACACAGATGACAGTGATCAAAAGGAACCTGAGAATATTATAAGAGAAGGAACCGACTTTTATAGGAGAGTCAATAGAACATCTTACATCTCTACTGAAGGGAACAATACTTTCAGCAACGGAGGATGTGGTTCCGGTTCTGATTCTGAAAAATCACAAAGCTCTATAACTTTCAACAAGACAGTTCGAAGCACTGAAATGTATTCTGTGGCCCAGTGGGATGTGTTCCGAAGACAGGATGTACTGAAGCTTCTAGAATACCTCAAAAGACACGCTGATGAGTTTTCTTATAACAATGAATATGACAGCAAGAAGATAGTTCACCCAATTCTAGATCAGAGCATCTTTCTGGACACTACTCACAAAATGAGACTGAAGGAGGAGTTCGATATCGAACCATGGACGTTTGAGCAACATGTCGGAGAAGCTTATTTGATTCTTGATATCCAGTGTTGTGTTCATGTGGTATTGGAATTTATGTCTGCTGAGAGTGTTGCTGAGTATATTCAATTGACTGATGAGATTCATCTGCTTCCAGAAGACCACAAAGCAAAAGCTGACAATCTGGAGGTGAAGAAAATGGCTCTTCATAGCATAAAGACAGCAATAAAAGAAATACGTGAGCTCACTTCCAATCCAAAACATTGA 2796 0.3866 MGKKSTKEDVKVECPPDNLRCSRTDGRQWRCRRPAMENVKLCEIHYLQGRHRQNKEKVPESLKLQRNMKMKKKKKRKNKNDVVEIRSKKKKKKKDIDVQLELIKMVLQREIEKKKKNVNWNNNEESELDYSEGELRKELPNGVMEIAPVSTPRDIDFHCHVTPRYFRSKNVDRRVPFDNLQDVSNLKKGRRKKCHWCQSSDSWNLIKCSNCQKQFFCMDCIKERYFDTQDEVKMACPVCRGTCTCKDCWTSHGKDSESKDYLAGTSRVDRILHFHYMICILLPVLKQMSEDQHTELETEAEIKGKNISDILIKQVEFDCKEKNYCNYCKTPILNLHRSCLCCSYSLCLRCCQAISHGSIFDHINSSMAKLPDKMDTCVANETHLLDDMTISSNNVIDTSMLHDSTGCNGTNNVSCPPTELGGCGDGHLDLRCVFSLSWIEEMEVKAEEIVCSYDVPEILDKNSSCSLCIDDGDRTNRYKQSQEAARREDSNDNCLFHPTVFDIRSDHFEHFQKHWGKGHPVIVQNVLRSTTHLSWDPLVMFCAYVERSITRYENNKDLLEACLDWWEVEINIRQHFTGSFRCQPQKNDWHETLNLNGWLSSQLFKEHFPSHFAEVIGSLPIQEYMNPRSGLLNIAAHMPEGSAKHDKGPYVYISHRCADKEAYSVLNLSYHPYDVVNMMAHTTDVPPSTEHLTKITKLLKKHRTMCQRGSSKITTEHTDDSDQKEPENIIREGTDFYRRVNRTSYISTEGNNTFSNGGCGSGSDSEKSQSSITFNKTVRSTEMYSVAQWDVFRRQDVLKLLEYLKRHADEFSYNNEYDSKKIVHPILDQSIFLDTTHKMRLKEEFDIEPWTFEQHVGEAYLILDIQCCVHVVLEFMSAESVAEYIQLTDEIHLLPEDHKAKADNLEVKKMALHSIKTAIKEIRELTSNPKH 931
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00244 931 Pfam WRC 16 57 IPR014977 -
Car01g00244 931 MobiDBLite consensus disorder prediction 706 725 - -
Car01g00244 931 SMART cupin_9 608 892 IPR003347 -
Car01g00244 931 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 13 927 IPR045109 GO:0032454|GO:0033169
Car01g00244 931 ProSiteProfiles WRC domain profile. 15 59 IPR014977 -
Car01g00244 931 ProSiteProfiles Zinc finger RING-type profile. 194 240 IPR001841 -
Car01g00244 931 Gene3D Cupin 499 901 - -
Car01g00244 931 PANTHER PROTEIN B160 13 927 - -
Car01g00244 931 SUPERFAMILY Clavaminate synthase-like 507 919 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00244 Car-Chr1 1824082 1829913 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00244 16 55 GRF Transcription Factor Family AT4G37740 52.500 1.19e-06 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00244 K15601 - gmx:100802129 1171.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01493 06 14546122 14551941 Car01g00244 01 1824082 1829913 PCT