Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00240 ATGGAAAACACAACAATGTTAGCACCATCAAATATTTCAGATAGATCAATAATTTGTTATACGCCAACCATGACAACAACAAGTGGTGTATGGCAAGGTGATAGCCCTTTAGATTATTCAATTCCTCTCTTCATTTTGCAATCAACCTTAGTTGTTCTCGCCACACGTTTCTTTGTTTTCATTCTCAAACCCTTTCATCAACCTCGTGTCATTGCTGAAATTATGGGTGGATTGCTGTTGGGGCCATCGGTACTTGGTAGAGATGAAAGGTTTGCAAATATGGTATTTCCTTTAAAAAGTGCAATGGTGATAGAAACAATGGCAAACATAGGTCTGATATACTTCCTATTCTTAGTTGGTTTAGAGATGGACATGTCTATTGTGAAACGCACTGGGCGAAAGGCGGTTTCTATTGCCGTTGCTGGTATGATATTGCCCTTTGTTATTGCTATTGGCATCTCTCATTTTATGGATTACAAAGACAAAGGTGCAAATGATGTTAGCTATGTCCTTTATCTTGGTATTGTTCTATCTGTCACTGCCTTTCCAGTGCTTGCTCGAATGCTTGCCGAGCTCAAACTTATTAACACAGAGCTAGGCAAGCTTGCACTTTCATCTTCCCTCATCAATGATGTGTGTGCATGGGTTTTGTTAGCTCTAGCTATTGCTTTATCAGAGCAAAATTCAAGTACTTTGGCTTCTGTTTGGGTTGTACTATCCAATATTTTCTTTGTTAGTTTCTGCTTTCTTGTTGTTAGGCCAGCAGTGACATGGTTGATCAAGAAAACTCCAGAAGGAAAACCCTTCAGTGAGTTCCAAATATGCATTGTACTTGTTGGTGTTTTGGTCTCAGCTTTCATTACAGATGTTATTGGAACACATTCTATTTTTGGAGCTTTTGTTTATGGCTTAGTGATTCCAAATGGCCCACTTGGAGCTGCTATAATAGAAAAGCTAGAAGACTTTGTTTCAGGGCTTTTACTCCCTCTTTTTTATGCTATTAGTGGTCTTAAGACTAATATTAACTTAATCCATGGAACTCGTTCATGGTCGTTTATATTCACAATCGTTCCTCTCACTTGTTTTGGAAAGATCTTAGGGACTCTCATTACCTCAATCCTTTTCGACATACCAACCCGTGATGGCATTGTTCTTGGTTTACTTATGAACACCAAAGGTCTTATTGAAATGATTGTGCTCAATATTGGGAGAGAACAAAAGGTGTTGGGTGATGAAATATTTTCAATTATGGTTATTGTAACAGTTATAATGACAGCAATAATTTCACCTATTGTGACATTAATCTATAAGCCAAGGAAAAGACTCGTACCTTACAAAAAGAGAACAGTGCAAAGCTCAAGAGTTGATGCAGAGTTAAGGGTGCTAGTGTGCATTCATGCTCCTAGAAATGTTCCTACAATAATCAATCTTCTAGAAGCAACACACCCAAGCAAAAGGTCTCCCATATGTGCCTATGTGCTCCACTTAGTTGAACTCACAGGTAGAGCTTCAGCCATGCTTGTTGTCCATGCCAGTAGACAATCAGGAGGACCAGCACTCAACAAAACACAAGCGCAAACAGAACACATCATCACCGCATTTCAGAACTTCGAGGAACATGTCGGTTATGTTGCGGTCCAACCTTTGACTGCTGTTTCACCTTACTCAACCATGCATGAAGACATATGCAATTTGGCTGAGGAAAAAAGGGTAGCAACAATCATCATTCCTTTTCATAAACAACAAACCGTCGATGGTGACATGAAGGAAACAAACCCGGCATTGAGAATGGTGAATCACAACTTATTACAAAGCTCTCCTTGCTCGGTTGGGATACTTGTCGATAGAGGCCTTAACGGATCAAACCGGTTAACTGCTAATCAAGCATCTCATCAGGTTGCTGTAATATTCTTCGGTGGAGCAGATGATAGGGAAGCGTTATCCTATGGATGGAGAATGTCAAGACATCCAAGAGTTCATCTCACTGTTATGCATTTCATTCCAGGAAAGGATGTAACTCAATTGAAGACCAATGATTTCAATCAGCTAGATGATCAAAGAAATATAATTACAAACAGAATAGATGAGGAGTGTATAAATGAGCTGAAGATGATAGCTGCAAATGATGACAAAATTAATTACATAGAAAAGGTTGTGAGTAATGGAGAGGAAACAGTGGCTGCAATAAGAGGAACAAACAATGCCAATGACCTCTTCATAGTTGGGAGAGGTCAGGGAAATTCTTCAACATTAACAGAAGGGTTGACAGATTGGAGTGAGTGTCCTGAGTTAGGACCCATTGGAGATTTGTTAGCTTCTTCAGACTTTGAAACAACAGCTTCAGTGCTTGTAATGCACCAATATGTTGCACAAGGTCCAGAAGGAGAGGACATTTTTGTATCTGATAGACCTTGGCAAACAAGTGAAAACTTTAATACCTTAAGACAACAACATAGGGGAAGATATGCAGCAGACAATAATGATTTTAAATTTTAA 2496 0.3914 MENTTMLAPSNISDRSIICYTPTMTTTSGVWQGDSPLDYSIPLFILQSTLVVLATRFFVFILKPFHQPRVIAEIMGGLLLGPSVLGRDERFANMVFPLKSAMVIETMANIGLIYFLFLVGLEMDMSIVKRTGRKAVSIAVAGMILPFVIAIGISHFMDYKDKGANDVSYVLYLGIVLSVTAFPVLARMLAELKLINTELGKLALSSSLINDVCAWVLLALAIALSEQNSSTLASVWVVLSNIFFVSFCFLVVRPAVTWLIKKTPEGKPFSEFQICIVLVGVLVSAFITDVIGTHSIFGAFVYGLVIPNGPLGAAIIEKLEDFVSGLLLPLFYAISGLKTNINLIHGTRSWSFIFTIVPLTCFGKILGTLITSILFDIPTRDGIVLGLLMNTKGLIEMIVLNIGREQKVLGDEIFSIMVIVTVIMTAIISPIVTLIYKPRKRLVPYKKRTVQSSRVDAELRVLVCIHAPRNVPTIINLLEATHPSKRSPICAYVLHLVELTGRASAMLVVHASRQSGGPALNKTQAQTEHIITAFQNFEEHVGYVAVQPLTAVSPYSTMHEDICNLAEEKRVATIIIPFHKQQTVDGDMKETNPALRMVNHNLLQSSPCSVGILVDRGLNGSNRLTANQASHQVAVIFFGGADDREALSYGWRMSRHPRVHLTVMHFIPGKDVTQLKTNDFNQLDDQRNIITNRIDEECINELKMIAANDDKINYIEKVVSNGEETVAAIRGTNNANDLFIVGRGQGNSSTLTEGLTDWSECPELGPIGDLLASSDFETTASVLVMHQYVAQGPEGEDIFVSDRPWQTSENFNTLRQQHRGRYAADNNDFKF 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00240 831 PANTHER CATION/H+ EXCHANGER 3 12 820 - -
Car01g00240 831 PANTHER CATION/H + ANTIPORTER 12 820 - -
Car01g00240 831 Pfam Sodium/hydrogen exchanger family 51 432 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Car01g00240 831 Gene3D - 43 442 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00240 Car-Chr1 1797047 1800575 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00240 13 809 Antiporter Super Family AT2G13620 62.236 0.0 1031
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00240 - - gmx:100800514 1274.61