Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00239 ATGGAATTTGATCTGGAAGACCCTCTAGCTAACTTCAAAGAACAACAAAACTATACTATATCAGAACTCTTTGCCTCAGAAACTAACCATATGCCCTCACCAAACTGCTTTAATTCAACACATTGTGAAGCCATTTCTCTCATTTTTCAGgttcagctttcttgcaatttGGAACCATTTGTAGCTTATCTTGCTATAAATTACTTCAACCGTTTCATGTCAAGGCAAGAAATTCCACAGGGGAAACCATGGTTAATTAGGCTCATTGTCACATCATGTCTTTCTCTTGCTTCAAAAATGAACAGCACACATTTATCATTTTCCAACTTGCAGAGAGAGGGTTGCAAGTTTGATGGTGAAAGTATTCAGAAAATGGAACTAGTTATTCTGGGAGCTCTGGATTGGCGTATGAGGTCAATTACACCTTTTCCTTTCTTGCATTTCTTCATCTCTTTAGCTGAAATCAAAGACCAATCACTTAAAGAGAGAGCTTCAGAGATAATCTTCAATGCTCATAATGAGATTAAGCTTTTAGAGTATAAACCCTCAACTGTTGCAGCAGCTTCCCTTATCTATGCATCTTATGAATTATTCCCACAGCAATATTCTATTATGAGAGATACAATTACAGCTTGTAAGCATATAGACCAGGAGACATTGGAAAAGTGCGTTGATTTGATGCAAGAGATGGAGAGAAATGAAGTAAAAGGGTTAATGAAAGATAGAAGGTTCTTAAGCAATGAAACAAGCACTAAACGGCAAAGAATCTGA 771 0.3593 MEFDLEDPLANFKEQQNYTISELFASETNHMPSPNCFNSTHCEAISLIFQVQLSCNLEPFVAYLAINYFNRFMSRQEIPQGKPWLIRLIVTSCLSLASKMNSTHLSFSNLQREGCKFDGESIQKMELVILGALDWRMRSITPFPFLHFFISLAEIKDQSLKERASEIIFNAHNEIKLLEYKPSTVAAASLIYASYELFPQQYSIMRDTITACKHIDQETLEKCVDLMQEMERNEVKGLMKDRRFLSNETSTKRQRI 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00239 256 Pfam Cyclin, C-terminal domain 140 233 IPR004367 -
Car01g00239 256 Pfam Cyclin, N-terminal domain 23 137 IPR006671 -
Car01g00239 256 SUPERFAMILY Cyclin-like 122 232 IPR036915 -
Car01g00239 256 SMART cyclin_7 46 131 IPR013763 -
Car01g00239 256 SUPERFAMILY Cyclin-like 12 137 IPR036915 -
Car01g00239 256 Gene3D - 33 138 - -
Car01g00239 256 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 5 249 - -
Car01g00239 256 SMART Cyclin_C_2 140 251 IPR004367 -
Car01g00239 256 Gene3D - 22 225 - -
Car01g00239 256 PANTHER CYCLINS 5 249 IPR039361 -
Car01g00239 256 CDD CYCLIN 44 130 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00239 Car-Chr1 1791981 1794046 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00239 1 231 Core Cell Cycle Gene Families AT4G03270 40.784 7.42e-58 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00239 K18812 - gmx:100799985 367.851