Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00236 ATGAAGAAGAAATGCGAACTGTGCAACAATCCTGCAAAATTGTTCTGTGAATCAGATCAAGCTAGTCTTTGTTGGGAATGTGATACAAAGGTTCACACTGCAAACTTCATCGTCACAAAGCATCACAGGTTTCTTCTATGTCATATTTGTCAATCTCTAACACCTTGGCATGGCACTGGACCCAACTTTGTACCTACCATCTCCCTATGCAACCACTGTGTCTCTCTTACCAACAataacaatcatgatcatgatcatcatggtgacacagatgatgatgatgatgatgaagaATATCAAGTGGTTCCATGGACATCTCCACCACAAGTTTCTACTAGTTCTTCAAACAGTTCAACTAGTAATACCAAATAG 372 0.3414 MKKKCELCNNPAKLFCESDQASLCWECDTKVHTANFIVTKHHRFLLCHICQSLTPWHGTGPNFVPTISLCNHCVSLTNNNNHDHDHHGDTDDDDDDEEYQVVPWTSPPQVSTSSSNSSTSNTK 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00236 123 Pfam B-box zinc finger 3 41 IPR000315 GO:0008270
Car01g00236 123 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 118 - -
Car01g00236 123 CDD Bbox1_BBX-like 4 46 - -
Car01g00236 123 ProSiteProfiles Zinc finger B-box type profile. 1 46 IPR000315 GO:0008270
Car01g00236 123 MobiDBLite consensus disorder prediction 104 123 - -
Car01g00236 123 MobiDBLite consensus disorder prediction 81 123 - -
Car01g00236 123 PANTHER B-BOX TYPE ZINC FINGER PROTEIN 1 118 - -
Car01g00236 123 SMART bboxneu5 1 46 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00236 Car-Chr1 1777788 1778423 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00236 1 86 C2C2-CO-like Transcription Factor Family AT4G27310 58.140 4.31e-34 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Car01g00236 zf-B_box 1.5e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00236 - - cam:101492786 210.305