Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00231 ATGATGAACGCACGCATAGTTTTTTCATTTTTATTCTCTTTCCTCTGTTTCTACACACGTGCGTCATCAAGTTCCAGAACAATTGTCAAACATGGAGAATTCATCAGAGACAAAGAAGGTGAAGTTTTAGTCTCCGAAAACTTCAACTTCGTAATGGGTTTCTTCGGTTTCGAAAACACTTCTTCACGTTACGTAGGAATTTGGTACTACAACATTCCTGGTCCTAAACTTATATGGGTTGCAAACAGAGACAAACCCATCAATAACAACGATGGTTCCTTCACTATATCAACAAATGGTAATTTAGTTATCCTCGATCAAAACAAAAAACAAATCTTTTCTACCAATGTTCACAACAAAAACATGAATAACTCCAAAGCTGTTCTTAGAGATGATGGTAACCTTGTTCTTTATAATGGGAAAATGGTGATTTGGGAAAGTTTTGAGAATCCAAGTGATACTTTTGTACCTGGTATGAAAGTTCCTGTGAAAAAGAAAAGCTTTTTCCTTACTTCATGGAAATCTAGTACAGATCCTTCATTAGGGAATTATAGTATGGGAGTTGATCCTGAAGGGTTGCCACCACAGATAGTAGTTTGGGAGGGAGAGAGAAGAAAGTGGAGAAGTGGTTATTGGGATGGTAGAATGTTTACTGGTGTTGATTTATTAGGTAATCTTCTTCATGGTTTTACACTTAATTGGGATAATGGAGATAGATATTTTGTTTATAATAATCAGATGAATAATAGTAAAGTGAGGTTTCAGATTGGTTGGGATGGTTATGAAAGAGAGTTTAATTGGAACGAAAGTGAAAAAGTTTGGAGTGAGACACAAAAAGGGCCTCAAAATGAGTGTGAGTTTTATAACAATTGTGGTGGTTTTGCAGCTTGTGATTTGTCGGTTTCGGGTTCGGCAATTTGTAGTTGTATAAAAGGGTTTGAACCAAAGGATAGAGATGAGTGGAATAATGGGAATAGGTCAGGTGGGTGTAAAAGGATGACGGCATTGAAGGTTGATCAGAAGAATGGTAATGGTAGTTTTGGTGAAGATGGTTTTTGGGAGCTTAAGTGTATGAAGTTGCCTGATTTTGCAAGTGTTGTTGATGCTAAGAATTGTAAAAGTTATTGTTTGGGGAATGCTTCTTGTATTGCTTATGCAGAAGTAATTGGAATTGGTTGTATGGTTTGGTTTGGAGAGTTGGTTGATGTTCAACACTTTGGACATGGAGGGAATACACTTCACATCCGTCTTGCTCATTCTGATTTAAGTAATGGAGGGAAAAGTAACAAGATTGTTGTGATAATATCAACTGTTCTAGCAGGATTAATCTGCCTAGGAATTATTGTATGGGGGATATGGAGGTACAGGAGAAAACTCAAAGTTTCTTCAGCTCCACGGTGCAAAAAAAGTGATGCACTACCAGTCTTTGATGCAACCAAGAGCAGAGAGATGTCAACAGAATTTTCAGGATCAATTGAAGTTAGTTTGGAAAGGAATCAACTAACCGGACCAGAACTTCCATTTTTCAATTTTAGTTGCATTTCATTAGCCACCAACAATTTTTCAGAAGAAAATAAGCTTGGGCAAGGGGGTTTCGGTCCTGTGTACAAGGGAAAGTTTCCATCCGGAGAAGAAATAGCTGTTAAGAGGCTTTCGAAACTGTCTGGCCAAGGTTCAGAGGAGTTCAAGAATGAAATGATGCTGATAGCAAAACTGCAACATAGAAATCTGGTTAGACTATTAGGTTGTTCTATTCAAGGGGAGGAAAAGTTGCTAGTTTATGAATTCATGCCGAACAAAAGCTTGGATTGCTTTTTATTTGATTCTATCAAACAAACACAGCTAGCCTGGACAAGACGCTATGAAATCATCGAAGGCATCGCAAGAGGACTACTTTATCTGCACCGTGATTCAAGACTCCGAATAATTCATCGAGATCTAAAGGCAAGCAACATTTTGTTAGATGAAAACATGAACCCAAAAATATCAGATTTTGGCTTGGCTCGAATATTTGGTGGAAACCAGAAGGAAGGCAATACAACCAGAGTGGTTGGTACATATGGTTATATGTCCCCTGAATATGCCATGGAAGGCCTATTTTCTGTCAAATCAGATGTGTATAGTTTCGGTGTATTGTTACTAGAGATTGTGAGTGGTCGCAGGAACACTAGCTTTCGTCACTCGGATGACTCAAGTCTTATAGGATATGCGTGGCATCTTTGGAACAAACGCAGAGCAATTGAACTGGTTGATCCTTGCATTCGAGATTGTAGTCCTAAAAACAAAGTTTTGAGATGCATACACATAGGAATGTTATGTGTGCAAGATTCAGCAGCTCATAGACCAAACATGTCGGCTGTTGTGCTGATGCTTGAAAGCGAAGCAACAACTCTTCCATCGCCGTCACAGCCTTTAATTACCTCCATGAGAACATCTCAGGACAGAGAGTTTTACATAGATTGTCTTGATGTTTCAAATGATCTCACTGTCACAATGGTAGTTGGGAGATAG 2511 0.3855 MMNARIVFSFLFSFLCFYTRASSSSRTIVKHGEFIRDKEGEVLVSENFNFVMGFFGFENTSSRYVGIWYYNIPGPKLIWVANRDKPINNNDGSFTISTNGNLVILDQNKKQIFSTNVHNKNMNNSKAVLRDDGNLVLYNGKMVIWESFENPSDTFVPGMKVPVKKKSFFLTSWKSSTDPSLGNYSMGVDPEGLPPQIVVWEGERRKWRSGYWDGRMFTGVDLLGNLLHGFTLNWDNGDRYFVYNNQMNNSKVRFQIGWDGYEREFNWNESEKVWSETQKGPQNECEFYNNCGGFAACDLSVSGSAICSCIKGFEPKDRDEWNNGNRSGGCKRMTALKVDQKNGNGSFGEDGFWELKCMKLPDFASVVDAKNCKSYCLGNASCIAYAEVIGIGCMVWFGELVDVQHFGHGGNTLHIRLAHSDLSNGGKSNKIVVIISTVLAGLICLGIIVWGIWRYRRKLKVSSAPRCKKSDALPVFDATKSREMSTEFSGSIEVSLERNQLTGPELPFFNFSCISLATNNFSEENKLGQGGFGPVYKGKFPSGEEIAVKRLSKLSGQGSEEFKNEMMLIAKLQHRNLVRLLGCSIQGEEKLLVYEFMPNKSLDCFLFDSIKQTQLAWTRRYEIIEGIARGLLYLHRDSRLRIIHRDLKASNILLDENMNPKISDFGLARIFGGNQKEGNTTRVVGTYGYMSPEYAMEGLFSVKSDVYSFGVLLLEIVSGRRNTSFRHSDDSSLIGYAWHLWNKRRAIELVDPCIRDCSPKNKVLRCIHIGMLCVQDSAAHRPNMSAVVLMLESEATTLPSPSQPLITSMRTSQDREFYIDCLDVSNDLTVTMVVGR 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00231 836 Gene3D Transferase(Phosphotransferase) domain 1 597 801 - -
Car01g00231 836 Gene3D Phosphorylase Kinase; domain 1 483 596 - -
Car01g00231 836 Pfam S-locus glycoprotein domain 207 316 IPR000858 GO:0048544
Car01g00231 836 PIRSF SRK 1 836 IPR024171 GO:0004674
Car01g00231 836 CDD STKc_IRAK 527 792 - -
Car01g00231 836 ProSiteProfiles EGF-like domain profile. 281 319 IPR000742 -
Car01g00231 836 ProSiteProfiles Bulb-type lectin domain profile. 26 150 IPR001480 -
Car01g00231 836 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 213 IPR036426 -
Car01g00231 836 Pfam D-mannose binding lectin 78 174 IPR001480 -
Car01g00231 836 Gene3D - 26 148 IPR036426 -
Car01g00231 836 SMART serkin_6 521 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g00231 836 ProSitePatterns Serine/Threonine protein kinases active-site signature. 642 654 IPR008271 GO:0004672|GO:0006468
Car01g00231 836 CDD PAN_AP_plant 342 418 - -
Car01g00231 836 Pfam Protein tyrosine and serine/threonine kinase 524 789 IPR001245 GO:0004672|GO:0006468
Car01g00231 836 Pfam PAN-like domain 348 403 IPR003609 -
Car01g00231 836 SUPERFAMILY Protein kinase-like (PK-like) 506 819 IPR011009 -
Car01g00231 836 SMART blect_4 34 151 IPR001480 -
Car01g00231 836 CDD B_lectin 40 151 IPR001480 -
Car01g00231 836 ProSiteProfiles Protein kinase domain profile. 521 806 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g00231 836 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 6 836 - -
Car01g00231 836 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 6 836 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00231 Car-Chr1 1751847 1755727 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00231 426 804 Receptor kinase-like Gene Family AT4G23230 55.643 1.39e-134 412
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Car01g00231 PK_Tyr_Ser-Thr 4.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00231 - - aprc:113869342 1266.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01489 06 14504469 14508415 Car01g00231 01 1751847 1755727 PCT