Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00228 ATGGAGAAAACAGAGTTCACCCTTCCATTTCTTGCTACTTGTTTTCTCTATTTAATATCTTTTTTTCCAACACCTTTGAAAGCAGAAGATACCATAACTCCACCACAATCCATCACTGGAAACCAAACACTAATTTCACCATCACAAAATTTTGAACTTGGTTTCTTCACTCCTAGAAATTCAACTTACACATATCTTGGAATATGGTATAAAAATATTCCAAAAAGAACTGTTATTTGGGTTGCAAATAGAGATAAACCACTTTTTAATTATAATGGTTCATTAACATTCAACAATGATGGAAAACTCATTATTCTCAACCACAAAAGAATTGTTCTTTGGTCCTCAAATTCATCTGGGTCAGCAAGAAATCCAGTAGCACAGCTTCTAGACACTGGAAACTTTGTTTTGAAGGATTTTGAAAATGGAAATTCTGAGAAATATTTGTGGCAAAGTTTTGATTATCCTTCTGACACATTGTTACCAAGAATGAAACTTGGTTGGAACTTCAAAACTGGTTTGAATATACATTTAACTTCTTGGAAAAGCAATGATGATCCTTCTTCAGGTGAATATAGTTACAGTGTTGATCCACGTGGACTTCCTCAGCTTTTTCTTCAAAAGGGTGATAAGAAAGTTTTCAGAAGTGGACCTTGGTATGTGAAACAATTCAAAGATGATCCAGTTTTAAGAGAAAATCCTGTTTTCAAACCAATATTTGTTTTTGATTCTGATCAAGTTTTGTATTCTTATGAGACTAAAGACAACATCATTTCAAGGTTTGTGCTTGGCGAATCTGGTTTGATTCAGCATTTTACATGGAATGATTATCATCTCAGTTGGTTTTCTGAATTCAATGTTCAAGGTGACCAATGTGATGATTATGGCTTTTGTGGTGCTTATGGAAGTTGTAACATAAAAAACTCTCCCATTTGTAAGTGTTTGAATGGTTTTGAGCCAAAGCTTATGCATGAATGGAAAATGCTTAAATGGTCTAGTGGATGTGTTAGGAAGAATTCAAGGGTTTGTATAAATGGAGATGTGTTTAAGAAGTTTACAGGAATGAAACTACCAGATGCTGTTGAGTTTCATGCAAACTATAGTATCAGCATTGATCAGTGTGAGGCAGAATGCTCCAAAAACTGTTCTCGTGTTGCTTATGCAAAACTTGATATAAATGCAAGTGGCAAAGGTTGTATTACTTGGTTTGATGATTTATTTGATATAAGGGAGGATTTTGTGAATGGACAAGATTTCTATTTGAGAGTTTCAGCTTCAGAACTAGGTACGAATATTGAAGATTCAAATGTTGAGAGAAGTAAAAGGAAGAAACTCATACTACTTCCTGTGAGTATATCAGTAACCTCAACTATTATTGTCTTAGCATTGTGGTTGATAATTAAGAAATGGAGAAGAAATGGAGCTGAAGTGACAGGTATTCAATTTAGTGTTGGCAGAAGTAGGAGTGAGTTTGAACTCCCATGTTTTGATATTTCCATTATTGAAGCTGCAACAGGGAATTTCTCTGTTTACAATAAGATTGGAGAAGGTGGATTTGGTCCTGTATACAAAGGCCAGCTTCCATCAGGACAAGAcatagcagtgaaaaggctttcagagaaatctgtacaaggcctgcaagagttcaagaatgaggttattttcatctctcaacttcagcatcgaaatctagtcaagcttcttggttgttgcattcatgaagaagataaaatgttggtctatgaatacatgccaaaTAGAAGCTTGGACACTTTATTATTTGATGAAATCAAGCGCTCTGCGCTTAGTTGGCAAAAGAGGCAAGACATAATTAACGGCATTGCTAGGGGACTTGTCTACCTTCATAGAGATTCGATATTAAGTTTAATTCATAGAGACTTGAAAACAAGCAACGttcttttagactgcgaaatgaatccaaagatttctggttttagaatggcgagaatgttagagggagatcaatatgaagaaaagactAAAAGGATAGTCGAAACCTATGGATACATGTCTCCAGAATATGCAATAGACGGACACTTTTCTTTCAAATCTGATGTTTATAGCTTTGGAGTTTTACTTTTAGAGCTATTAAGTGGCAAGAAAAACAAAGGGTTTTTTCACCCTGATCACAAATTGAATCTCCTAGGCCATGCATGGAAGCTTTGGAATGAAGGTAGGGGCATTGAGCTGATGGATCCATTACTTGAGGATGATATTCCTACCCCTGAATCAATTTTAAAGTGTATTCAAGTTGGTCTTTTATGTGTTCAAGAACAGCCAGAAGAAAGGCCAACAATGTCATTAGTGGTTTTGATGTTGGATGGTGAAAGTGTGTTGCTCCCAAAACCTAAAAGACCAGGTTTGTATTCAGAGAGGTGTTTCTTAGACACAGATTCATCATCATGTGGTATGCTAAATTCTGTTACTACTTTGGTTGAGGGTCGTTAA 2469 0.3204 MEKTEFTLPFLATCFLYLISFFPTPLKAEDTITPPQSITGNQTLISPSQNFELGFFTPRNSTYTYLGIWYKNIPKRTVIWVANRDKPLFNYNGSLTFNNDGKLIILNHKRIVLWSSNSSGSARNPVAQLLDTGNFVLKDFENGNSEKYLWQSFDYPSDTLLPRMKLGWNFKTGLNIHLTSWKSNDDPSSGEYSYSVDPRGLPQLFLQKGDKKVFRSGPWYVKQFKDDPVLRENPVFKPIFVFDSDQVLYSYETKDNIISRFVLGESGLIQHFTWNDYHLSWFSEFNVQGDQCDDYGFCGAYGSCNIKNSPICKCLNGFEPKLMHEWKMLKWSSGCVRKNSRVCINGDVFKKFTGMKLPDAVEFHANYSISIDQCEAECSKNCSRVAYAKLDINASGKGCITWFDDLFDIREDFVNGQDFYLRVSASELGTNIEDSNVERSKRKKLILLPVSISVTSTIIVLALWLIIKKWRRNGAEVTGIQFSVGRSRSEFELPCFDISIIEAATGNFSVYNKIGEGGFGPVYKGQLPSGQDIAVKRLSEKSVQGLQEFKNEVIFISQLQHRNLVKLLGCCIHEEDKMLVYEYMPNRSLDTLLFDEIKRSALSWQKRQDIINGIARGLVYLHRDSILSLIHRDLKTSNVLLDCEMNPKISGFRMARMLEGDQYEEKTKRIVETYGYMSPEYAIDGHFSFKSDVYSFGVLLLELLSGKKNKGFFHPDHKLNLLGHAWKLWNEGRGIELMDPLLEDDIPTPESILKCIQVGLLCVQEQPEERPTMSLVVLMLDGESVLLPKPKRPGLYSERCFLDTDSSSCGMLNSVTTLVEGR 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00228 822 ProSiteProfiles Protein kinase domain profile. 508 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g00228 822 CDD B_lectin 36 156 IPR001480 -
Car01g00228 822 Pfam D-mannose binding lectin 77 182 IPR001480 -
Car01g00228 822 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 20 813 - -
Car01g00228 822 SMART blect_4 35 156 IPR001480 -
Car01g00228 822 CDD PAN_AP_plant 345 424 - -
Car01g00228 822 Gene3D - 25 153 IPR036426 -
Car01g00228 822 SMART ntp_6 344 423 IPR003609 -
Car01g00228 822 PIRSF SRK 2 821 IPR024171 GO:0004674
Car01g00228 822 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 20 813 - -
Car01g00228 822 Pfam S-locus glycoprotein domain 214 321 IPR000858 GO:0048544
Car01g00228 822 Gene3D Phosphorylase Kinase; domain 1 479 583 - -
Car01g00228 822 ProSitePatterns Serine/Threonine protein kinases active-site signature. 629 641 IPR008271 GO:0004672|GO:0006468
Car01g00228 822 CDD STKc_IRAK 514 782 - -
Car01g00228 822 Pfam PAN-like domain 343 409 IPR003609 -
Car01g00228 822 Pfam Protein tyrosine and serine/threonine kinase 510 777 IPR001245 GO:0004672|GO:0006468
Car01g00228 822 SMART serkin_6 508 756 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g00228 822 SUPERFAMILY alpha-D-mannose-specific plant lectins 78 187 IPR036426 -
Car01g00228 822 ProSiteProfiles PAN/Apple domain profile. 343 424 IPR003609 -
Car01g00228 822 ProSiteProfiles Bulb-type lectin domain profile. 29 150 IPR001480 -
Car01g00228 822 Gene3D Transferase(Phosphotransferase) domain 1 584 785 - -
Car01g00228 822 SUPERFAMILY Protein kinase-like (PK-like) 490 780 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00228 Car-Chr1 1731577 1735194 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00228 438 795 Receptor kinase-like Gene Family AT4G05200 51.657 1.44e-116 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Car01g00228 PK_Tyr_Ser-Thr 6.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00228 - - gmx:100804024 1286.55