Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00218 ATGCTTGAAATTTGTCTTTCTCTCAAGAGAAAGCTTCAATGCAAACCAAACCCAAAACAAGTTCATGATCCAAAGACATGTAGGAGCAAAAAAGGTAATCAAAGAACAAAGTCAAGTTTACTTGATCATTCAAAAATCCAAGGTGTCATCCAAGGAAGCAAGAGGTACTTAAAAAATTCATCAAGTTTCAAACCAAAACATAACATTGAAATTAGTGATCTTATAAACTATGAAACTGTTCATGACGGTTCAATAAGTCAAATTTGTCCATGTTGTGTTTCTCGTCAAAGCAATAGTGGTAGTAAGGATTTTGAAGGTTCTTATAGAACAACAAAAAGGGCTTCTACATCTTCAAGGATAACCAATCCTTTTGATTATAGTGAAGCAAATGTGTCATATAAAACAAGGTTGTTGGTTCAGGTGGATTCTGTTGGTCCTTCAATATTGATATGTTACAAATGTGGTGAGAAACTGAAAAACCTTGTTGCTGTTGAAACACACCATATCACTGAGCATTCAGTGGCTGAACTTCAAGAAGATTCATCTAGGCAAATTGTTGAAACAATATGTGGAAGTGGAACAAGCTCTGTTAGTTCTGAATTGAGTCAGATTGATTGTATCTTAAAAGTCCACAACATGTCAAAAAGCTTTACATGCTTTGAGGAATATAGAGAAATGATAAAGATTAAATCCAACAAGCTACATCATAAGAATCATCCACGTTGCATGGTTGATGGAAATGAGCTTTTAAGGTTTCATGGCACTAGCATTGCATGTTCTCTTGGCACAAATAGCTCTTATAGCCTATGCACTTTAGACTATTGTGGTGTATGTCAAATTCTAAGGCATGGTTTCTCTACTAACAAGGAATTTCAAGGTGCATTAGGTGTTTACACAACTTCTACAAGTGGAAAAGCTTTTGATTCTATTAGACTATGTGATGAGAGACCATTTACAAGAAAATCAGTTATAGTGTGTAGAGTAATAGCTGGGAGAGTTCATTGTCCTTTTGAAGAAAAAGTTGATTCAGGATTTGATTCCTTGGCAGAAAAGATTAGTAATCATTCAGATATTGAGGAACTATATTTGTTGAATCCTAAAGCTCTGCTTCCATGCTTTGTGGTAATCTACAAGCAATAA 1140 0.3474 MLEICLSLKRKLQCKPNPKQVHDPKTCRSKKGNQRTKSSLLDHSKIQGVIQGSKRYLKNSSSFKPKHNIEISDLINYETVHDGSISQICPCCVSRQSNSGSKDFEGSYRTTKRASTSSRITNPFDYSEANVSYKTRLLVQVDSVGPSILICYKCGEKLKNLVAVETHHITEHSVAELQEDSSRQIVETICGSGTSSVSSELSQIDCILKVHNMSKSFTCFEEYREMIKIKSNKLHHKNHPRCMVDGNELLRFHGTSIACSLGTNSSYSLCTLDYCGVCQILRHGFSTNKEFQGALGVYTTSTSGKAFDSIRLCDERPFTRKSVIVCRVIAGRVHCPFEEKVDSGFDSLAEKISNHSDIEELYLLNPKALLPCFVVIYKQ 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00218 379 SUPERFAMILY ADP-ribosylation 179 378 - -
Car01g00218 379 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 2 378 - -
Car01g00218 379 Gene3D - 161 378 - -
Car01g00218 379 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 2 378 - -
Car01g00218 379 MobiDBLite consensus disorder prediction 16 38 - -
Car01g00218 379 MobiDBLite consensus disorder prediction 16 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00218 Car-Chr1 1670784 1672950 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00218 4 378 C2H2 Transcription Factor Family AT5G54630 37.885 1.16e-82 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00218 - - gmx:100792577 471.855