Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00216 ATGGCCCCGAAGAAGCAACGCCCTTCCCCGATCGACGAACCACccaccgcctcctcctcctcctcttcatccGAAGAGGATGATGACCAGCAACCTTCGTCCCACCAACCagaagacgaagtagaaaaatcagcttcatccgaagaagaagacgatgaagaagaaggttcatccgaagatgaagatgaagaagaTCAACCTCAACCACCTTCACAGCCTGCTTCCAAAAACCCTCCACCTTCTACTCCCAGCCTCAAAACTAAACCCTCTTCTTCTtccgaatacgaaaccggatccgaatccgacccggaacccactccacctcccaatcctaaAGTCAAACCACTCGCCTCCAAGCCCATGAAGGCCCAACCACTGGCCCAAGCCCAATCTACCCCCGTGCCTGCCAGATCTGGAACCAAGCGTGCTGCTGAGAACGGAAATGACTCCAAACGTTCCAAGAAGAAAACATCCGCCGTCACTACTGGCGGTGATTCAGACGATGAAATGGAGGCGGAACCGACCACCGGTGAAGACTCTAAGAAGTTGTTTCAGAGACTGTTCAGCGAAGAAGACGAGCTCATAATTCTAAAAAACCTAGCTGATTTCATTTCCAAAACGAAGAAGGATCCACTGAAAGACCACGTTGCATTTCATACTTTTGTGAAGAAATCGCTTCATGTGGACGCAACAAGCGAACAAGTGAAGCAGAAGGTTCGTAGGTTGAAGAAGAAGTTCGAGACCAGTGACTCTTTTACCAAACCCCATGACAAAAAAGCTTTTGAACTTTACAAAAAGGTACGGGGCAATAAACCCAACAAAGCCGAAGAAAACGGAAAAAACCTCAAGAGTCCCAACAAGGAAGCTAGTGCTAAAAACGGTAATGAAGGTCCTGCTAAGAAAGAATTAGCAACTAAGAAGGAACCTGAAAAAGTGGTTGAAAATTCAAGTTTGCCTTTGACTGAAATGTTTCGTTTTGACAGTGGTGTTGGTTTGTCTGGTTTGAATGAGAATGTGGCGAAAAAGGGATTGGAGTTGATTGAGAATTCTAAGAGGGTCGATTTAGAGGATAAGTGGAAGGAGCTGCAAATTGTGGAGATGGAGCTATTTTTGGAGCGGGCACAGCTGATTAGGGATCAGACTAGTGCTTTGGTGAAGTGCCAAGGTTAA 1170 0.3949 MAPKKQRPSPIDEPPTASSSSSSSEEDDDQQPSSHQPEDEVEKSASSEEEDDEEEGSSEDEDEEDQPQPPSQPASKNPPPSTPSLKTKPSSSSEYETGSESDPEPTPPPNPKVKPLASKPMKAQPLAQAQSTPVPARSGTKRAAENGNDSKRSKKKTSAVTTGGDSDDEMEAEPTTGEDSKKLFQRLFSEEDELIILKNLADFISKTKKDPLKDHVAFHTFVKKSLHVDATSEQVKQKVRRLKKKFETSDSFTKPHDKKAFELYKKVRGNKPNKAEENGKNLKSPNKEASAKNGNEGPAKKELATKKEPEKVVENSSLPLTEMFRFDSGVGLSGLNENVAKKGLELIENSKRVDLEDKWKELQIVEMELFLERAQLIRDQTSALVKCQG 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00216 389 MobiDBLite consensus disorder prediction 12 27 - -
Car01g00216 389 MobiDBLite consensus disorder prediction 43 67 - -
Car01g00216 389 MobiDBLite consensus disorder prediction 265 309 - -
Car01g00216 389 MobiDBLite consensus disorder prediction 71 85 - -
Car01g00216 389 PANTHER BNAANNG10740D PROTEIN-RELATED 12 385 IPR007592 GO:0006355
Car01g00216 389 PANTHER STOREKEEPER PROTEIN 12 385 - -
Car01g00216 389 MobiDBLite consensus disorder prediction 1 182 - -
Car01g00216 389 MobiDBLite consensus disorder prediction 265 283 - -
Car01g00216 389 MobiDBLite consensus disorder prediction 28 42 - -
Car01g00216 389 Pfam Protein of unknown function, DUF573 184 267 IPR007592 GO:0006355
Car01g00216 389 MobiDBLite consensus disorder prediction 86 100 - -
Car01g00216 389 MobiDBLite consensus disorder prediction 144 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00216 Car-Chr1 1661089 1663159 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00216 75 385 GeBP Transcription Factor Family AT4G00390 31.915 3.62e-26 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Car01g00216 DUF573 6.4e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00216 - - cam:101512869 617.076