Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00215 ATGGCTTCCCGGAACCAGAACCGGCCACCGCGAAGTCCCTCCAACAAAAAAGGAGGAGGTGTTGAAGAAGTTCCTTCAGACAAACGTAGAAGGATTGGATTTGAAAAAACGGATCGACAAGGTCGAGCTAGGGCTCCATTTGGTGCAGTCAACAACAAAACAGAAGCCAATGATGTTGGTAGTGCAGAAGGATCTGAATGTAGCACCATTGATTTCACCAAAGAGGAAGTAGAGGCTTTGTTGAATGAGAGAATGAAAAAGGGAACTCCCTATGATAATAAGAAAAAAATGGAGCAGATGGGGGATCTTATCAAGCGACTTAAAAACTGTGTTAGATGGTTTAAGAGAGTTGAAGAAGGATACATTCAAGAAAAAGAAAAGCTTCAGACTGATCTAGAATCTGCTGAGAAGAAATGTATTGATACTGAGAATGAGATGAAAATTAAGATAGAAGAATTGAATGAGGCTATATCGGATTTGAGGGTGACGATTTCCTCTTTAGAAGAGAGGATTGCGAAGGAAGAATCAGATAAATTGGAAGCAATTGAAAGTTATAGAAAAGAAAAAGAAGCCAGAAATGCAGCTGAGCAGATGAAAGCTTCTCTCTCAACTGAACTTGAGAAAGTTTGCAATGAGAAATCAGCTGCTGAGCGGAAGGCCATTTCGAATGAGGACCTGTACAAGCGATCGCAAGAGTATAATATCAGTTTGCAGCAGTACAATAGTCGCCTTCAGTCAAATCTTGACACAGTTAATGAGACTCATAAACGACTTGAAGTAGAGAAATCAAGTATTGTTGAGAACCTTAGCAATGTAAGGGGCCACAATAAGGCATTGCAAGAGCAGTTGGCATCTCTTAAAGCTTCACAAGATGAGGCTACAAAGGCAAAAGAAATGTTAGCCAATGAACTCAAATGCCTCCGAGATGAGTTAAAACAAATTAGAGACGACCGTGATCGCCAACTGGGACAAGTACAAGCTTTAACCGGAGAAGTAACAAAATACAAAGAATTTACAGGAAAATCAAGTGAACAATTGGATACATTGACGACTAAAACAAATGCTCTCGAGGAGATATGTACTTCCCAAAGGCAGCAAATAGATATGTTGCAGCAACAATTGAATGCTGAAAAGCAGAAGTTAAAGATGGCCGATATGTCTGTTTCAGAAACAAGAACAGTGTTTGAAGATCAGAAAAAAATTATAGATCAACTACGAGAGAGGCTGGCAGAAAAAGAATTCCAAGTAATTGAAGGAGAGACATTACGTAAAAAACTGCACAACACTATTCTGGAGTTAAAAGGAAATATCCGTGTGTTCTGCCGTGTCCGACCTTTGCTACCCGATGATGGTCCTGCAGCAGACATGGTAAAGTATTCTTTTACATTTGACAAAGTATTTAATCAGGAGGCTTCTCAGGAGGATGTTTTCACTGAGATTTCACAGCTTGTACAAAGCGCACTTGATGGGTACAAGGTTTGTATTTTTGCTTATGGGCAAACAGGTTCTGGAAAAACGTATACGATGGTTGGCAGGCCTGGTCCCCCTGGTCTGAAAGGCTTGATACCCCGTTCACTTGAACAAATATTCCTGGTTAGCCAGTCCCTGAAAGATCAAGGGTGGAAGTACACAATGCAGGCATCAGTACTTGAAATCTACAACGAGACCATTAGGGATTTGTTATCACCAACAGAAAATCCTGGAAAGAAGTACACTATTATACATGATGCCAATGGAAAAAACACACATGTTCCAGACCTGACTATTGTGGATGTTTGCGGTGCAGATGAGATTTCCACCCTCCTACAAAAGGCTGCACAAAGCAGGTCAGTAGGAAAAACACAGATGAATGAACAGTCATCACGAAGTCACTTCGTTTTTACATTGCGAATATTTGGCATTAATGAGAACACTGAACAACAGGTTCAAGGTGTGTTAAACCTGATTGATCTCGCTGGAAGTGAAAGGCTGTCGAAGAGTGGAGCCACTGGGGACCGTTTGAATGAAGCTAAGGCTATAAACAAAAGTCTTTCCTGTTTGAGTGATGTCATTTTTGCTTTAGCAAAGAAAGAGGATCATGTCCCCTTTAGAAATTCTAAACTGACTACCCTTCTCCAGCCATGTCTTGGCGGAGATTCTAAGACTTTAATGTTTGTAAATATTTCGCCTGACCCATCTTCGACTGGAGAGTCACTTTGCTCTCTTCGTTTTGCTGCGAGAGTAAATTCTTGTGAGATTGGTATTCCTCGGCGTCAGACATCCACAAAGTCCTCTGATTCTCGTTTGAGCTATGGCTAA 2298 0.4099 MASRNQNRPPRSPSNKKGGGVEEVPSDKRRRIGFEKTDRQGRARAPFGAVNNKTEANDVGSAEGSECSTIDFTKEEVEALLNERMKKGTPYDNKKKMEQMGDLIKRLKNCVRWFKRVEEGYIQEKEKLQTDLESAEKKCIDTENEMKIKIEELNEAISDLRVTISSLEERIAKEESDKLEAIESYRKEKEARNAAEQMKASLSTELEKVCNEKSAAERKAISNEDLYKRSQEYNISLQQYNSRLQSNLDTVNETHKRLEVEKSSIVENLSNVRGHNKALQEQLASLKASQDEATKAKEMLANELKCLRDELKQIRDDRDRQLGQVQALTGEVTKYKEFTGKSSEQLDTLTTKTNALEEICTSQRQQIDMLQQQLNAEKQKLKMADMSVSETRTVFEDQKKIIDQLRERLAEKEFQVIEGETLRKKLHNTILELKGNIRVFCRVRPLLPDDGPAADMVKYSFTFDKVFNQEASQEDVFTEISQLVQSALDGYKVCIFAYGQTGSGKTYTMVGRPGPPGLKGLIPRSLEQIFLVSQSLKDQGWKYTMQASVLEIYNETIRDLLSPTENPGKKYTIIHDANGKNTHVPDLTIVDVCGADEISTLLQKAAQSRSVGKTQMNEQSSRSHFVFTLRIFGINENTEQQVQGVLNLIDLAGSERLSKSGATGDRLNEAKAINKSLSCLSDVIFALAKKEDHVPFRNSKLTTLLQPCLGGDSKTLMFVNISPDPSSTGESLCSLRFAARVNSCEIGIPRRQTSTKSSDSRLSYG 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00215 765 Coils Coil 395 415 - -
Car01g00215 765 PANTHER KINESIN-LIKE PROTEIN 3 454 - -
Car01g00215 765 PANTHER KINESIN-LIKE PROTEIN 458 765 - -
Car01g00215 765 Coils Coil 118 219 - -
Car01g00215 765 ProSiteProfiles Kinesin motor domain profile. 436 744 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car01g00215 765 Gene3D Kinesin motor domain 440 744 IPR036961 -
Car01g00215 765 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 397 743 IPR027417 -
Car01g00215 765 Coils Coil 360 387 - -
Car01g00215 765 Coils Coil 269 324 - -
Car01g00215 765 ProSitePatterns Kinesin motor domain signature. 644 655 IPR019821 GO:0003777|GO:0005524|GO:0007018
Car01g00215 765 SMART kinesin_4 434 752 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car01g00215 765 Coils Coil 241 261 - -
Car01g00215 765 MobiDBLite consensus disorder prediction 21 42 - -
Car01g00215 765 PANTHER KINESIN-LIKE PROTEIN KLP-3 3 454 - -
Car01g00215 765 PANTHER KINESIN-LIKE PROTEIN KLP-3 458 765 - -
Car01g00215 765 Gene3D - 265 439 - -
Car01g00215 765 CDD KISc_C_terminal 434 746 - -
Car01g00215 765 PRINTS Kinesin heavy chain signature 490 511 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car01g00215 765 PRINTS Kinesin heavy chain signature 614 631 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car01g00215 765 PRINTS Kinesin heavy chain signature 645 663 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car01g00215 765 PRINTS Kinesin heavy chain signature 694 715 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car01g00215 765 MobiDBLite consensus disorder prediction 1 66 - -
Car01g00215 765 Pfam Kinesin motor domain 457 743 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00215 Car-Chr1 1650567 1657013 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00215 408 756 Calmodulin-binding Proteins AT5G65930 40.599 8.59e-81 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00215 K10405 - gmx:100818473 1157.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01466 06 14187977 14193678 Car01g00215 01 1650567 1657013 PCT