Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00195 ATGGAGACCTGGTTCATCACTCTCGTATCTATCTCCATATGCTTGTTAATCAGAGCAACCCTCTCCATAATCACTACCAAAAACAATAACAAAAGCATAATAACCACCCCACTCCCACCTGGCCCACCACACATACCAATCATCACAAGCATCCTATGGCTAACTAAATCATTCTCACAACTCGAACCTTTTCTCCAAACTCTCCACGCCAAACACGGCCCTATCATCACTCTCCGTATCGGTTCACGTCCTTCCGTTTTCATCTCCGACCGTACTCTCGCCCACCACGCTCTCGTCCACAACTCCTCCCTCTTCTCCGACCGCCCCAAATCTCTTCCCACTAACAAAATCATCTCAAGCAACCAACACAACATAAGTTCCGCATCTTACGGTGCCACGTGGCGCACTCTCCGTCGTAACCTCGCTTCTGAGATGCTACACCCTTCCCGTATCAAATCATTTTCCGAAATTCGTAAGTGGGTCCTACACACGCTCATTAACCGTCTCAATTCTGTTTCATCAACCGATTCTGTTACGGTCGTTGAACACTTTCAATATGCTATGTTTTGTTTACTTGTTTTTATGTGTTTTGGTGAAAGAGTTAACGATGATAAAATAAGTGATATTGAGCGTGTTCAACGGGACCTTCTTTTGAGTCTTAATAAATTCAATATTTTAAATTTTTGGCCCAACGTTACTCGGATTTTGTTCCGTAAACGTTGGGACTTGTTGATGAAATTGCGTAAGGATCAAAATGATGTTCTGCTTCCTCTGGTAATTCAGAGGAAGCAAATTAAAGAAAATAGAATTGGTaataacaacaacaacaacaGTGTTGTTTCGTATGTGGATACTCTTTTGGAATTGGAATTGCCGGAGGAAAAACGGAAGTTGAATGAAGATGAAATTATTAGTCTCTGTTCGGAGTTTTTGAACGCCGGTACAGATACTACTTCGACAGCTTTGCAGTGGATTATGGCAAATTTGGTGAAGTATCCGAATGTGCAGAGGAGACTTGTGGAGGAGATTAAGGAGGTGATGGGTGGTGGTAATGGAGAGAAAAAGAAGGAGGAAGTGGAAGAGGAAGATTTGCATAAAATGAAGTATTTGAAGTGTGTGGTTTTGGAAGGGTTAAGGCGTCATCCACCGGGGCATTTTGTGTTGCCACACGCGGTGACTGAGGATGTGGTTTTGAATGGTTATTTGGTGCCTAAAAATGGGACGGTGAATTTTATGGTGGCGGAGATGGGGTGGGATCCTCGTGTTTGGGAGGATCCAATGGAGTTTAAGCCAGAGAGGTTTTTGAAAGAGGAAACTTTTGATATTACAGGGAGTAAAGAGATTAAGATGATGCCGTTTGGAGCTGGGAGGAGAATTTGTCCTGGATATAATTTAGCTTTGCTTCATTTGGAATATTTTGTGGCTAATTTGATTTGGAATTTTGATTGGAAGGTTCCCGAGGGTGGATATGTTGATTTGTCGGAGAAACAGGAATTTACTATGGTCATGAAAAATCCATTGCAAGTTCATATTTCTCCAAGGATCTTCTAG 1551 0.4191 METWFITLVSISICLLIRATLSIITTKNNNKSIITTPLPPGPPHIPIITSILWLTKSFSQLEPFLQTLHAKHGPIITLRIGSRPSVFISDRTLAHHALVHNSSLFSDRPKSLPTNKIISSNQHNISSASYGATWRTLRRNLASEMLHPSRIKSFSEIRKWVLHTLINRLNSVSSTDSVTVVEHFQYAMFCLLVFMCFGERVNDDKISDIERVQRDLLLSLNKFNILNFWPNVTRILFRKRWDLLMKLRKDQNDVLLPLVIQRKQIKENRIGNNNNNNSVVSYVDTLLELELPEEKRKLNEDEIISLCSEFLNAGTDTTSTALQWIMANLVKYPNVQRRLVEEIKEVMGGGNGEKKKEEVEEEDLHKMKYLKCVVLEGLRRHPPGHFVLPHAVTEDVVLNGYLVPKNGTVNFMVAEMGWDPRVWEDPMEFKPERFLKEETFDITGSKEIKMMPFGAGRRICPGYNLALLHLEYFVANLIWNFDWKVPEGGYVDLSEKQEFTMVMKNPLQVHISPRIF 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00195 516 Pfam Cytochrome P450 39 506 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car01g00195 516 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 453 462 IPR017972 GO:0005506|GO:0016705
Car01g00195 516 Gene3D Cytochrome P450 33 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car01g00195 516 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 4 513 - -
Car01g00195 516 SUPERFAMILY Cytochrome P450 39 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car01g00195 516 PRINTS P450 superfamily signature 313 330 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car01g00195 516 PRINTS P450 superfamily signature 372 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car01g00195 516 PRINTS P450 superfamily signature 451 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car01g00195 516 PRINTS P450 superfamily signature 460 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car01g00195 516 PANTHER CYTOCHROME P450 4 513 - -
Car01g00195 516 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car01g00195 516 PRINTS E-class P450 group I signature 93 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car01g00195 516 PRINTS E-class P450 group I signature 187 205 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car01g00195 516 PRINTS E-class P450 group I signature 302 319 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car01g00195 516 PRINTS E-class P450 group I signature 322 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car01g00195 516 PRINTS E-class P450 group I signature 412 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car01g00195 516 PRINTS E-class P450 group I signature 450 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car01g00195 516 PRINTS E-class P450 group I signature 460 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00195 Car-Chr1 1482298 1484369 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00195 1 514 Cytochrome P450 AT1G64940 56.840 0.0 615
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00195 K24184 - gmx:100792037 729.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g00195 01 1482298 1484369 Car01g00195 01 1482298 1484369 ECH