Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00191 ATGCAAATGGAGAACTATTCATATCAATCATACCCAGATTCAGGAGACTCCTCTCCTCGTTCAAGAGAAATCGACTTCGAAAACCCACCCACAACAATACCATGGGACGATcaacaacaactacaacaacaaAGTTACAAAGTCAAGTTCATGTGCAGCTACGGTGGCAAGATCCAACCGCGCACACACGACAATCAACTCTCTTATGTTGGTGGTGAAACTAAAATCCTAGCCGTTGATCGTAACATCAAGTTCCCCTTATTGATCTCCAAGCTCTGTTCTCTTATCGAAGCACCTGATGTCTCTTTTAAGTACCAGCTCCCTGGCGAGGATCTCGATGCTCTAATCTCAGTAACCAACGATGATGATCTTGACCACATGATGCATGAATACGATCGTCTCTCCCGTGCTTCCGCTAGACCCGCACGTATGCGATTATTTCTTTTTGTTAACGATTCCACTCCATCTTCAAACCCACCCGACCCGATTAAACCAGCCAACGTTGACTATCTTTTTGGTATTGAAAAACCGGTAACAGTTACTCCGCCTCCCGCCGCCGTTAAATTTCACGATCCTGTGCCGGAACCGGTTGCTCCGCTACCAGAATTTCATCCTCGACAAGCTTTGAATCCATCTGATCGGGTTACAGCTTCGGATCCGGGTTTAAATCATCAGATTGAAATTCAGAGGCAGTTACAGCGGATGCAGATTGCGGCGGAGAACGAGCAAACTGCTTATCGGAGAAAAAGCGAAGATAATTTCGTCGGAAACTATTCTACCGGAGATTATTACGTTCAGAAAGTGCCGGAGAAATTCCCGGTGTCTAATTTTTCAGCACCGCAGCAACATCAACCGGGTTATTGGCAGGAAAAGCCTGTTCCCGGCGAGGCTTATCCGCCGGTTGCGCCTGGAGGAGGAGACCAGCCTGTTTATATGGTTCCGGCGCCGGGAAATTACTATAATACGCAGCCGGTGATGCGTCCACCCGTAACTCAAGGATACTACGCTGTGCAACGAATGCCATCCGATTCTTACCGTGAAACGCAGGTTTACGGCGGCGCACCTCCTTCTAAAGCGCCGTTTTCGTCGGGGATGTCGGCGAATTATGCACCGGCGCAGCCGGTTAAAGGTCCTGCGTATGCGGAAGGAGTTAGTGTGGTTCGGTCGACTGGGATACCGGATAATTCGGTAGGTTCGTACGCACAAGTGGCGTATGATAGTGCAAGTGGCAGACAAGTTTATTATACTGCGCCAGGTGGGGTAGTACACGCTCCGCCGTACCAAGGAGTTGCTGCGCCTGTCACCACAGACGTTAAAGGGATGAGCAAGATTTCTCAAGGTTCAGTTTGA 1350 0.4844 MQMENYSYQSYPDSGDSSPRSREIDFENPPTTIPWDDQQQLQQQSYKVKFMCSYGGKIQPRTHDNQLSYVGGETKILAVDRNIKFPLLISKLCSLIEAPDVSFKYQLPGEDLDALISVTNDDDLDHMMHEYDRLSRASARPARMRLFLFVNDSTPSSNPPDPIKPANVDYLFGIEKPVTVTPPPAAVKFHDPVPEPVAPLPEFHPRQALNPSDRVTASDPGLNHQIEIQRQLQRMQIAAENEQTAYRRKSEDNFVGNYSTGDYYVQKVPEKFPVSNFSAPQQHQPGYWQEKPVPGEAYPPVAPGGGDQPVYMVPAPGNYYNTQPVMRPPVTQGYYAVQRMPSDSYRETQVYGGAPPSKAPFSSGMSANYAPAQPVKGPAYAEGVSVVRSTGIPDNSVGSYAQVAYDSASGRQVYYTAPGGVVHAPPYQGVAAPVTTDVKGMSKISQGSV 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00191 449 Gene3D - 68 152 - -
Car01g00191 449 SMART PB1_new 62 151 IPR000270 GO:0005515
Car01g00191 449 SUPERFAMILY CAD & PB1 domains 63 159 - -
Car01g00191 449 MobiDBLite consensus disorder prediction 1 31 - -
Car01g00191 449 PANTHER OS05G0427100 PROTEIN-RELATED 3 440 - -
Car01g00191 449 Pfam PB1 domain 63 150 IPR000270 GO:0005515
Car01g00191 449 MobiDBLite consensus disorder prediction 1 17 - -
Car01g00191 449 CDD PB1_UP2 51 149 - -
Car01g00191 449 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P 3 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00191 Car-Chr1 1449723 1451710 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00191 46 158 MAP Kinase Kinase Kinase AT5G57610 49.558 7.08e-27 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00191 - - pvu:PHAVU_006G199200g 546.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01445 06 13990193 13991814 Car01g00191 01 1449723 1451710 PCT