Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00175 ATGGCTGAAGTTATTTCAGAACCTGCCGTTGTTGTTTCTGATCCCTCTCAGATTGAAGTCAAACTCTTTAATCGATGGAGCTTCGACGATGTTCAGCTTTCCGATGTGTCTCTGATTGATTACATTGGAGTTGTGCCATCGAAACATGCTACTTATGTTCCACACACTGCTGGTAGATACTCTGTCAAGCGTTTCAGGAAGGCTCAGTGTCCAATTGTTGAGAGGCTTACAAATTCACTCATGATGCACGGTAGGAACAATGGAAAGAAGCTTAAGGCTGTCACAATCATTAGGCATGCTATGGAAATTATTCATTTGCTTACTGACCTGAACCCCATTCAAGTTATTGTTGATGCTGTCATTAACAGGTATGCTTTGTATTTTCTGCCAGAAAAAGATTTCCATGTTATGATTTATGAGTTTTTAATTGCAGCAGAAATTGTGTTTGATATTGTGATAACTGTCTTTGATTTTCAATTATTGGAATGA 489 0.3845 MAEVISEPAVVVSDPSQIEVKLFNRWSFDDVQLSDVSLIDYIGVVPSKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLKAVTIIRHAMEIIHLLTDLNPIQVIVDAVINRYALYFLPEKDFHVMIYEFLIAAEIVFDIVITVFDFQLLE 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00175 162 PANTHER RIBOSOMAL PROTEIN S7 6 122 IPR000235 GO:0006412
Car01g00175 162 Pfam Ribosomal protein S7p/S5e 62 122 IPR023798 -
Car01g00175 162 Gene3D Ribosomal protein S7 domain 4 125 IPR036823 -
Car01g00175 162 SUPERFAMILY Ribosomal protein S7 21 123 IPR036823 -
Car01g00175 162 ProSitePatterns Ribosomal protein S7 signature. 74 100 IPR020606 GO:0003723|GO:0003735|GO:0006412
Car01g00175 162 PANTHER 40S RIBOSOMAL PROTEIN S5 6 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00175 Car-Chr1 1315158 1316007 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00175 19 122 Cytoplasmic Ribosomal Protein Gene Family AT2G37270 85.577 1.26e-67 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00175 K02989 - gmx:100815850 207.223