Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00162 ATGGGAGTGGAGAAGCAAGTTGTGAGACCTGGAACCGGTCCCAAGCCACTTCCCGGTCAAAACGTTACTGTTCACTGCACCGGTTACGGGAAAAACGGTGACCTTTCTCAGAAGTTCTGGAGCACAAAGGATCCTGGCCAGAGCCCCTTCTCTTTCAAAATCGGCCAAGGTTCTGTCATCAAAGGATGGGATGAGGGTGTTATCGGCATGCAAATAGGCGAAGTTGCTCGTCTCCGGTGCTCTCCTGATTATGCTTATGGTGCTGGTGGCTTTCCTGCTTGGGGAATACAGCCCAACTCTGTCTTGGAGTTTGAGATCGAGGTCTTAAGTGCACAATGA 339 0.5103 MGVEKQVVRPGTGPKPLPGQNVTVHCTGYGKNGDLSQKFWSTKDPGQSPFSFKIGQGSVIKGWDEGVIGMQIGEVARLRCSPDYAYGAGGFPAWGIQPNSVLEFEIEVLSAQ 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00162 112 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 111 - -
Car01g00162 112 Gene3D - 1 112 IPR046357 GO:0003755
Car01g00162 112 SUPERFAMILY FKBP-like 2 110 - -
Car01g00162 112 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 19 112 IPR001179 GO:0003755
Car01g00162 112 PANTHER PEPTIDYLPROLYL ISOMERASE 1 111 - -
Car01g00162 112 MobiDBLite consensus disorder prediction 1 22 - -
Car01g00162 112 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 15 109 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00162 Car-Chr1 1225103 1231252 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00162 2 110 Calmodulin-binding Proteins AT5G48570 40.909 9.11e-17 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00162 K01802 - gmx:100305505 228.024