LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Car01g00161	ATGGTTAAGCACTATGAGTCTTGGCCTTGTCCACAGCATGTGGCTTGGCCATCACTTTATATGAATTGTGCGCCGGATCACGGTTTGTGTGGTCATTCATCATATCTGAATCCTAGTGCGTCCACTTTTCCTGCTGTCAGTGCATTTCCAGGATTCACAGCTCATGCTACCCCAAGCCTGCGGACTGATCAGACCAACGAAGTGCAAGGGTTCATTCAGGATCCCAAAACAGAGCCGTGTTTGAAAGAAATGCATATTAGCGGAGCTACGCAAAATGCAAATCCTGCATCTTTGCAGAAGAAGTTTATTATTTTTGACCAATCCGGTAATAAGACAAGGTTGTTTTATAGTCCTGTCTTCCCACTTGTTCAGAGTCCAATTGTTACTACTAAACAATTTGCTCAAGCTGATGATGTAAATCGGGAAGTAAGGGCAACTAGTTATGCTCAAAAACATTTACCAAAATACACTTTTCCGGAAGAATCAGAGAAAGATCAAGATCATGTAGTTAATGAAGAAAGTGAAATGCATGAAGACACTGAAGAAATCAATGCATTACTTTGttctgatgattgtgattatgattctgatgattatgacgacGAGGTAACAAGTACAGGCCATTCTCCATTGGCTACTGAAAAGACTAATTTGATGCAAGAACAAATTGAGGACACAAAGGAGGATGTCGCTAGCTCTGATCGGCCAAACAAAAGGCATAAGTTAGTTGATGGTGGGTACATGAGATTACAACTGCCTGCGGACAGTGCTGGTTCAGTAAGACTAAATGAACCATGCGAGTGTGTTAGTGATGCCGAATCGAAGTATTCTGGCAGCCAAATGTGTTCTGCCAGGGGAACTGAAGAAGATAATTCAGTAGTTGGTGATATTCAATTGAAAAAGGATAAAATTCGTAAAACGTTGAGAGCTCTTGAGAACATAACTCCTGGAGCAAAAGGAAAACATCCGCTGTTAGTCATTGATGAAACTATTGATTACTTAAAATCTTTGATGTCCCAAACTGGTATGATTGGGGTGAAATATCATCACTAA	1053	0.3932	MVKHYESWPCPQHVAWPSLYMNCAPDHGLCGHSSYLNPSASTFPAVSAFPGFTAHATPSLRTDQTNEVQGFIQDPKTEPCLKEMHISGATQNANPASLQKKFIIFDQSGNKTRLFYSPVFPLVQSPIVTTKQFAQADDVNREVRATSYAQKHLPKYTFPEESEKDQDHVVNEESEMHEDTEEINALLCSDDCDYDSDDYDDEVTSTGHSPLATEKTNLMQEQIEDTKEDVASSDRPNKRHKLVDGGYMRLQLPADSAGSVRLNEPCECVSDAESKYSGSQMCSARGTEEDNSVVGDIQLKKDKIRKTLRALENITPGAKGKHPLLVIDETIDYLKSLMSQTGMIGVKYHH	350

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Car01g00161	350	MobiDBLite	consensus disorder prediction	160	181	-	-
	Car01g00161	350	PANTHER	TRANSCRIPTION FACTOR BHLH145	8	349	IPR037546	-
	Car01g00161	350	PANTHER	TRANSCRIPTION FACTOR SAC51	8	349	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Car01g00161	Car-Chr1	1218187	1221495	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Car01g00161	80	337	Basic Helix-Loop-Helix Transcription Factor Gene Family	AT5G09460	40.449	2.14e-31	119

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Car01g00161	-		-	gmx:100778385	412.92