Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00135 ATGAGTTCATCTTCTTCAATTCTTTCAATCCCAAATCCAACAGCAATGGATTCTACTGTGAAGCAGATAACACTTTTCAAACCTCTGAATCTGAGTCTTAATTTTCGCAGAGGCATCCAACAGAAGCAGCAACTCAACTATCGCGTTCGCTTCCACAACTCTGTTATGCCACTGCGGTGCTCAATTTCTTCTTCCGGTGGGGACCACCTCCATGATGCTAGCATCGTTCTCCATGTTCGGGGAATGATGTGTGAGGGTTGTGCAGCTAGTGTTAAAAGAATTTTAGAAACTCAACCACAAGTGTTATCTGCTACTGTGAATCTAGCATCTGAGACAGCACTAGTTTCACCTTTACTATCCGAAGAAAAAACTGCACCAAATTGGCAAAAGCAGTTAGGAGAGACACTTGCAAACCATTTAACTACATGTGGTTTTGCTTCTACCCTTAGAGTGTGGTGGGTTAAGTGGCAGGTGAGGAAGATAGAGACTAAAGGAATTATCATCTAG 507 0.426 MSSSSSILSIPNPTAMDSTVKQITLFKPLNLSLNFRRGIQQKQQLNYRVRFHNSVMPLRCSISSSGGDHLHDASIVLHVRGMMCEGCAASVKRILETQPQVLSATVNLASETALVSPLLSEEKTAPNWQKQLGETLANHLTTCGFASTLRVWWVKWQVRKIETKGIII 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00135 168 ProSiteProfiles Heavy-metal-associated domain profile. 74 149 IPR006121 GO:0046872
Car01g00135 168 Pfam Heavy-metal-associated domain 77 123 IPR006121 GO:0046872
Car01g00135 168 Gene3D - 73 151 - -
Car01g00135 168 PANTHER ATP7, ISOFORM B 66 148 - -
Car01g00135 168 PANTHER COPPER-TRANSPORTING ATPASE PAA1, CHLOROPLASTIC 66 148 - -
Car01g00135 168 SUPERFAMILY HMA, heavy metal-associated domain 74 117 IPR036163 GO:0046872
Car01g00135 168 CDD HMA 76 115 IPR006121 GO:0046872
Car01g00135 168 ProSitePatterns Heavy-metal-associated domain. 79 108 IPR017969 GO:0046872
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00135 75 151 Primary Pumps ATPases AT4G33520 67.532 1.52e-29 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00135 - K17686 mtr:MTR_7g116990 175.252