Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00130 ATGAAGTTTCCTTTTTTTGTTCTTCAACTTATTGCTACTTTTTCACTTCTTGTTATAGCTCAAGAAGATCCTAAAGGAAACTCCAAAGAGAATATAATTTCATCAGATAAAAATAACAACAATTCCAATCTTTTATTATTAATTCTCAATGTAGTTCTTCTTCTAGCAATTATATTGCTATTGATACTTTACTATAACACATCAAAAAAGCTCAACAAAATAGTAAAGAGACACATTAACACATCTTATAGTGAATTACAagagaaagatgttgagacaagaagtattgagaagaggatagagataggagaAGGAACAACAATGATGACAGTTGAAGAGAGAAAGGAACTAATGTTTTTTAATGATGAGATAAAGTTTCAAATGGGAGAACTTCTTAAAGCTTCTGCTGAGGCATTGGGTCATGGAATTATGGGAAATAGTTATAAGGCTATGTTGCATAATAATGGAGCTACTATTGTTGTCAAGAGGTTAAGGGACTTGAAACCATTCACTAAGATGGAATTTGCAAAGACATTGCAAATGATTGCTGATCTTAAGCACCCCAATTTGTTGCCTTTGCTTGCTTATTACCATTCTAGAGATGAGAAGTTGATGCTCTATAGATATGCACAGAATGGAAATCTTTTCTCCAGACTTTATGATGGAAGAGATGGAAACAGGGTTCCATTCAGTTGGAACTCAAGATTATCAGTGGCAAGAGGCGTAGCTCGAGCATTAGAGTACCTTCACCTCAACAACAAGATCCATAACATTGTCCCTCATGGAAATTTGAAGTCATCAAATGTAGTATTTGATGAAAATTATTCAGTTCTTGTATCTGATTTTAGCCTTGCCTCTTTAATAGCACAACCGATTGCAGCTCAGCATATGGTTGTTTACAAATCACCTGAATATGGATATGCAAGAAAAGTTACAAAGCAATCAGATGTATGGAGCTATGGATCACTTTTAATAGAAATTCTAACCGGGAAAGTATCAGTTTGTTCAGCTCCACAAGGGACTAATGGGGTTGATCTTTGTAGCTGGGTTCATAGAGCTGTTAGAGAAGAATGGACTGCTGAGATATTTGACAAAGAAATATCTTGTCAAAAGAGTGCTCTTCCTGGGATGCTAAGGTTGCTGCAGATAGCAATGAGATGTATTGAGAGGTTACCAGAGAAACGTCCTGAGATGAAAGAGGTGGTGAGGGAAGTTGAGAAAATACAACAGGTGCACTTGTTATCTGAAGATGAGGATGATGTGTCTTGTGATAGGTCTCTAACTGATGATTCCTTTTCAACTAGTACCTCAGGGATTATTGGagatgaaagatag 1335 0.3431 MKFPFFVLQLIATFSLLVIAQEDPKGNSKENIISSDKNNNNSNLLLLILNVVLLLAIILLLILYYNTSKKLNKIVKRHINTSYSELQEKDVETRSIEKRIEIGEGTTMMTVEERKELMFFNDEIKFQMGELLKASAEALGHGIMGNSYKAMLHNNGATIVVKRLRDLKPFTKMEFAKTLQMIADLKHPNLLPLLAYYHSRDEKLMLYRYAQNGNLFSRLYDGRDGNRVPFSWNSRLSVARGVARALEYLHLNNKIHNIVPHGNLKSSNVVFDENYSVLVSDFSLASLIAQPIAAQHMVVYKSPEYGYARKVTKQSDVWSYGSLLIEILTGKVSVCSAPQGTNGVDLCSWVHRAVREEWTAEIFDKEISCQKSALPGMLRLLQIAMRCIERLPEKRPEMKEVVREVEKIQQVHLLSEDEDDVSCDRSLTDDSFSTSTSGIIGDER 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00130 444 SMART serkin_6 133 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g00130 444 MobiDBLite consensus disorder prediction 427 444 - -
Car01g00130 444 SUPERFAMILY Protein kinase-like (PK-like) 137 411 IPR011009 -
Car01g00130 444 MobiDBLite consensus disorder prediction 416 444 - -
Car01g00130 444 Pfam Protein tyrosine and serine/threonine kinase 137 404 IPR001245 GO:0004672|GO:0006468
Car01g00130 444 Gene3D Transferase(Phosphotransferase) domain 1 210 430 - -
Car01g00130 444 PANTHER RECEPTOR-LIKE KINASE 25 440 - -
Car01g00130 444 Gene3D Phosphorylase Kinase; domain 1 99 209 - -
Car01g00130 444 ProSiteProfiles Protein kinase domain profile. 133 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g00130 444 PANTHER OS05G0588300 PROTEIN 25 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00130 Car-Chr1 1005522 1007603 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00130 97 420 Receptor kinase-like Gene Family AT2G36570 39.474 9.20e-75 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Car01g00130 PK_Tyr_Ser-Thr 1.1e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00130 - - cam:101502784 794.653
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g00130 01 1005522 1007603 Car01g00130 01 1005522 1007603 ECH