Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00129 ATGGACGGTAGTAGTTTGTTTAAGGTTGTGTTTGTTTTGAGCATTGTGAATTTGACAGTAGTGCATGGCCAAGGGACACGTGTAGGATTCTATTCAAGCACATGTTCAGAAGCTGAATCCATTGTTAAGTCGACAGTTACATCACATGTTAATTCTGATTCATCTTTGGCTGCTGGATTACTTAGGATGCACTTCCATGATTGCTTTGTTCAAGGTTGTGATGCCTCTGTTCTCGTTTCTGGCTCTGCCACTGAAAGAACAGCACTTCAAAACCTTGGTTtaagaggttatgaagttattgatgatgctaagacaaaactcgaggctacgtgtcctggtgttgtctcttgtgctgatattcttgctcttgcagctcgtgattctgtcgttctgAGTGGTGGACTGAGCTGGCAAGTGCCTACTGGACGCCGAGATGGACACGTGTCACAAGCTTCTGATGTAGCAAATAACTTGCTTAGTCCTACTGATTCACTTGATGTCCAAAAACAAAGGTTTGCATCTAAGGGTCTCAACACTCAAGATCTTGTCACTCTAGTTGGGGGACATACTATTGGTACTACTTTATGTCAATTATTCAGTAACAGATTATACAACTTCACTGCAAATGGTGGTGCTGATCCTTCCATTGACTCTTCATTTCTTCCACAATTACAAACATTATGTCCTCAAAACAGTGGTGCTTCAAACAGAGTTGCATTGGATAATGGAAGTCAAAACAAATTTGATAATTCTTACTATGCTAATCTAAGGAACGGGCGTGGAATTCTTCAATCTGATCAAGCACTTTGGAATGATCCTTCTACAAAGATATTTGTGCAGAGATATTTGGGTTTAAGAGGGTTACTTGGATTAACATTTAATGTTGAATTTGGAAGATCAATGGTGAAAATGAGCAATATTGGAGTGAAGACTGGTTCAGATGGTGAAATCCGCAAGATATGTTCAGCTTTTAATTAA 978 0.3476 MDGSSLFKVVFVLSIVNLTVVHGQGTRVGFYSSTCSEAESIVKSTVTSHVNSDSSLAAGLLRMHFHDCFVQGCDASVLVSGSATERTALQNLGLRGYEVIDDAKTKLEATCPGVVSCADILALAARDSVVLSGGLSWQVPTGRRDGHVSQASDVANNLLSPTDSLDVQKQRFASKGLNTQDLVTLVGGHTIGTTLCQLFSNRLYNFTANGGADPSIDSSFLPQLQTLCPQNSGASNRVALDNGSQNKFDNSYYANLRNGRGILQSDQALWNDPSTKIFVQRYLGLRGLLGLTFNVEFGRSMVKMSNIGVKTGSDGEIRKICSAFN 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00129 325 ProSiteProfiles Plant heme peroxidase family profile. 25 325 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car01g00129 325 Pfam Peroxidase 42 282 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car01g00129 325 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601
Car01g00129 325 PANTHER PEROXIDASE 5 323 - -
Car01g00129 325 PANTHER PEROXIDASE 25-RELATED 5 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car01g00129 325 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car01g00129 325 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car01g00129 325 PRINTS Plant peroxidase signature 95 108 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car01g00129 325 PRINTS Plant peroxidase signature 114 124 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car01g00129 325 PRINTS Plant peroxidase signature 133 148 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car01g00129 325 PRINTS Plant peroxidase signature 180 192 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car01g00129 325 PRINTS Plant peroxidase signature 239 254 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car01g00129 325 PRINTS Plant peroxidase signature 255 272 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car01g00129 325 PRINTS Plant peroxidase signature 299 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car01g00129 325 CDD secretory_peroxidase 27 324 IPR033905 GO:0004601|GO:0042744
Car01g00129 325 Gene3D Peroxidase, domain 2 159 304 - -
Car01g00129 325 SUPERFAMILY Heme-dependent peroxidases 27 325 IPR010255 GO:0004601|GO:0006979|GO:0020037
Car01g00129 325 Gene3D - 29 325 - -
Car01g00129 325 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car01g00129 325 PRINTS Haem peroxidase superfamily signature 115 132 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car01g00129 325 PRINTS Haem peroxidase superfamily signature 133 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car01g00129 325 PRINTS Haem peroxidase superfamily signature 181 196 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car01g00129 325 PRINTS Haem peroxidase superfamily signature 241 256 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car01g00129 325 ProSitePatterns Peroxidases proximal heme-ligand signature. 181 191 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00129 Car-Chr1 1001510 1003275 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00129 3 325 Peroxidase AT2G41480 59.877 4.44e-141 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00129 K00430 - gmx:100789782 490.345