Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00124 ATGGATTTTTCATTATCCTTAAGAAGCTCAAGCCTAATTAGCATTCCCAAACCATACCAAAATAATATCAAGCTTCAAATAAGACAACCTCGTATGAAGTTCACTAGTGTTTCATGTGGAGCCACAAAAAAGGTTCAAGTTGATGGTGAGAGCAATAACTTGTACAAGATATTAAATTTGAGTCCAAAAAATGCAAGCATGGATGACATAAAGAGAGCATATCGAAGAATGGCTCTTAAGTATCATCCTGATGTGTGTCACAATCGTTTGAAGAAAGAGGAATCAACGAGGATGTTTGTACAACTCAATGTAGCTTATAATACGTTGTCGAATCCAAGGCTTAAAGCGGAGTATGACTTTGAATTGGGTTTGGATTTGAGAAGtaataataatattaatattaatgttagtgataatagttggaaaaataaGTGGATGGAACAATTGGTTGAATTGAAAAGAAGGTCTCATACACGTATGGAACAAAAAGGTGGATCATGGGGTAGTAGAATGAGGGCTCAAAACAATATTAAAGATGATGATCATAATTAG 552 0.3315 MDFSLSLRSSSLISIPKPYQNNIKLQIRQPRMKFTSVSCGATKKVQVDGESNNLYKILNLSPKNASMDDIKRAYRRMALKYHPDVCHNRLKKEESTRMFVQLNVAYNTLSNPRLKAEYDFELGLDLRSNNNININVSDNSWKNKWMEQLVELKRRSHTRMEQKGGSWGSRMRAQNNIKDDDHN 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00124 183 MobiDBLite consensus disorder prediction 156 183 - -
Car01g00124 183 PRINTS DnaJ domain signature 56 74 IPR001623 -
Car01g00124 183 PRINTS DnaJ domain signature 74 89 IPR001623 -
Car01g00124 183 PRINTS DnaJ domain signature 94 114 IPR001623 -
Car01g00124 183 SMART dnaj_3 52 114 IPR001623 -
Car01g00124 183 CDD DnaJ 53 111 IPR001623 -
Car01g00124 183 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 21 179 - -
Car01g00124 183 ProSitePatterns Nt-dnaJ domain signature. 99 118 IPR018253 -
Car01g00124 183 Pfam DnaJ domain 53 119 IPR001623 -
Car01g00124 183 ProSiteProfiles dnaJ domain profile. 53 122 IPR001623 -
Car01g00124 183 Gene3D DnaJ domain 40 147 IPR036869 -
Car01g00124 183 PANTHER CHAPERONE DNAJ DOMAIN PROTEIN 21 179 - -
Car01g00124 183 SUPERFAMILY Chaperone J-domain 49 122 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00124 Car-Chr1 978897 979494 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00124 55 119 C2H2 Transcription Factor Family AT1G74250 41.791 1.89e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00124 - - vun:114187063 187.578