Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00123 ATGGAGGAAATAAAAAGTGATGCTACTTCACTTAGACATGATGACATTTTGCCACAGATTCATAAAGTTACATCTCCTCCTAAGCAGACACTTTTTCAAGAAATCAAACATTCTTTCAATGAGACTTTCTTCTCAGATGACCCTTTTGCCAAGTTTAAGGACCAAACAACATCAAGAAAGTTTATTCTAGGAGTTCAATCTGTTTTCCCTATTTTTGAATGGGGAAAGGGTTACAACCTTCAAAAATTTAAGAGTGATTTCATTTCTGGACTCACCATTGCAAGTCTTTGCATTCCTCAGGATATTGCGTATGCACAACTTGCAAATTTGGAACCACATTATGCACTATATACAAGTTTTGTTGCTCCTCTTGTGTATGCTTTCATGGGAAGTTCAAGGGATATTGCTATAGGTCCTGTTGCTGTGGTTTCCCTTTTGCTTGGATCCTTGCTAACAGATGAGATCAGTGATTACAAAAGTCATGAATACCTGCGTCTTGCTTTTACTGCCACTTTCTTTGCAGGAATCACTCAAATGGCACTTGGAATTCTCAGGCTTGGTTTCTTGATTGACTTCCTATCTCATGCTGCCATTGTTGGATTCATGGCTGGAGCTGCCATTACAATTGCACTACAACAGCTTAAAGGTCTTCTTGGCATAAAACACTTCACTAAGAAAACTGATATTGTTTCCGTCATGAGATCGGTTTGGAGTTCAGTCCACCATGGCTGGAATTGGGAAACAATAGTAATTGGAGTAGCATTCTTGGCTTTCCTTCTTACAACAAAGTATATAGCTAAGAAGAATAAGAAACTATTTTGGGTAGCTGCAATTTCTCCAATAATATCTGTTATATTGTCTACTTTTTGTGTGTTTATTACAAGGGCAGACAAAAAAGGAGTAGCAATTGTGAAAAATATTAAAAAGGGTGTGAATCCATCATCTGTTAGTGAAATATATTTCAGTGGAAAATATCTTAGTGCTGGTATTAGGATTGGTGTGGTGTCTGGTATGGTAGCACTCACTGAAGCTGTGGCCATTGGAAGAACATTTGCTGCAATGAAAGACTATTCATTGGATGGTAACAGAGAAATGGTGGCACTTGGAACAATGAACCTTATTGGTTCAATGACATCTTGTTATGTTGCTACAGGATCTTTTTCGCGTTCGGCTGTGAACTATATGGCTGGTTGTAAAACTGCTGTATCAAACATAGTTATGTCCATGGTGTTATTGTTAACTCTATTACTAATTACACCACTATTCAAGTACACTCCAAATGCAGTGCTTGCCTCAATTATTATAGCTGCTGTAATGGGCCTGGTAGACATTGAAGCAGCTGTTCTTCTCTGGAAGATTGATAAATTTGATTTTCTAGCTTGCATGGGAGCCTTCTTTGGTGTCATTTTCATAAGTGTTGAGATTGGCCTTCTAATCGCAGTTGCAATATCTTTTGCCAAAATCCTTTTACAAGTGACAAGGCCAAGGACTGCAGTACTTGGTAAGCTTCCAGGGACTACTGTTTATAGGAACATCTTGCAATACCCTAAAGCAGCACAAATTCCTGGCATGCTTATCATTAGAGTTGATTCTGCAATCTACTTCTCAAATTCCAACTACATCAAGGACAGAATATTGAAGTGGTTGAGTGATGAAGAGACTCAAAGGATAGCAAGTGAATTTCCTAGTATACAATATCTCATTGTTGAAATGTCACCTGTTACTGATATTGATACTAGTGGCATCCATGCCTTTGAAGATTTACTTAAGAGCCTCAAGAAAAGAGAAGTCCAGCTTATTCTGGCAAACCCGGGACCAATTGTAACTGAGAAGCTTGATGCATCAAAATTAAGAGTCTTAATTGGTGAAGATAAAATATTTCTAACAGTAGGTGATGCTGTTGAAACTTTTGGTCCAAAGGGTACAAATTTATGA 1935 0.3793 MEEIKSDATSLRHDDILPQIHKVTSPPKQTLFQEIKHSFNETFFSDDPFAKFKDQTTSRKFILGVQSVFPIFEWGKGYNLQKFKSDFISGLTIASLCIPQDIAYAQLANLEPHYALYTSFVAPLVYAFMGSSRDIAIGPVAVVSLLLGSLLTDEISDYKSHEYLRLAFTATFFAGITQMALGILRLGFLIDFLSHAAIVGFMAGAAITIALQQLKGLLGIKHFTKKTDIVSVMRSVWSSVHHGWNWETIVIGVAFLAFLLTTKYIAKKNKKLFWVAAISPIISVILSTFCVFITRADKKGVAIVKNIKKGVNPSSVSEIYFSGKYLSAGIRIGVVSGMVALTEAVAIGRTFAAMKDYSLDGNREMVALGTMNLIGSMTSCYVATGSFSRSAVNYMAGCKTAVSNIVMSMVLLLTLLLITPLFKYTPNAVLASIIIAAVMGLVDIEAAVLLWKIDKFDFLACMGAFFGVIFISVEIGLLIAVAISFAKILLQVTRPRTAVLGKLPGTTVYRNILQYPKAAQIPGMLIIRVDSAIYFSNSNYIKDRILKWLSDEETQRIASEFPSIQYLIVEMSPVTDIDTSGIHAFEDLLKSLKKREVQLILANPGPIVTEKLDASKLRVLIGEDKIFLTVGDAVETFGPKGTNL 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00123 644 Pfam Sulfate permease family 83 462 IPR011547 GO:0016021
Car01g00123 644 PANTHER HIGH AFFINITY SULFATE TRANSPORTER 6 643 - -
Car01g00123 644 CDD STAS_SulP_like_sulfate_transporter 515 630 - -
Car01g00123 644 Pfam STAS domain 515 633 IPR002645 -
Car01g00123 644 SUPERFAMILY SpoIIaa-like 516 638 IPR036513 -
Car01g00123 644 ProSiteProfiles STAS domain profile. 514 637 IPR002645 -
Car01g00123 644 TIGRFAM sulP: sulfate permease 70 633 IPR001902 GO:0015301|GO:0016020|GO:0055085
Car01g00123 644 Gene3D STAS domain 494 638 IPR036513 -
Car01g00123 644 PANTHER SULFATE TRANSPORTER 6 643 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00123 Car-Chr1 973232 978107 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00123 18 640 Inorganic Solute Cotransporters AT1G22150 72.276 0.0 906
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00123 K17470 - gmx:100784124 1054.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g00123 01 973232 978107 Car01g00123 01 973232 978107 ECH