Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00122 ATGAGTCAGGTTTTTAGTAATGATGCTGTGGCAAGGGCCGTGGAAGAAATAAAAAGTGGTCCTAGTTCACGGAGACATGCTGATATTTTGGCGCCACATATTCACAAAGTTGAATCTCCTCCTAAACAGACACTTTTCCAAGAAATCAAACATTCTTTCAATGAGACTTTCTTCTCAGATGACCCTTTTGCCAAGTTTCAGGGTCAAACAAAATCAAGAAAGTTTATTCTAGGAGTCCAATCTGTTTTCCCTATTTTTGAATGGGGACAGGGCTACAACCTTCAAAAGTTCAAGGGTGATTTCATTGCTGGACTCACCATTGCAAGTCTTTGCATTCCTCAGgatattgcatatgcaaagcttgcaaatttaaagccagaatatggactatATACAAGTTTTGTTGCTCCTCTTGTGTATGCTTTCATGGGAAGTTCAAGAGATATTGCCATAGGACCTGTAGCTGTGGTGTCCCTTTTGCTTGGAACCTTGCTAACTGATGAGATCAGTGATTACACAGATCCTGACTATCTGCGTCTTGCATTTACTGCCACTTTCTTTGCAGGAATCACTCAAATGGCACTAGGATTTCTCAGGCTTGGTTTCTTGATTGACTTCTTATCTCATGCTGCCATTGTTGGATTCATGGGTGGAGCTGCTGTTACTATTGCACTGCAACAGCTTAAAGGTCTTCTTGGCGTTAAAGACTTCACTAAGAAAACTGATATTGTTTCTGTCATGAGATCGGTTTGGAGTGCAGTCCACCATGGGTGGAATTGGGAGACAATAGTAATTGGACTAGCATTCTTGGCTTTCCTTCTTACAACAAAGTATATTGCTAAGAAGAATAAGAAACTCTTTTGGGTATCTGCAATTTCTCCTATGATATGTGTTATACTGTCTACTTTATTTGTATTCCTTACAAGAGCAGACAAGAAAGGAGTAGCAATTGTGAAACATATTAAAAAAGGTGTAAATCCATCATCTGTTAGTGAAATAATTTTGAGTGGAAAATATCTCAGTGCTGGTATTAGGATTGGTGTGGTGTCCGGTATGGTAGCACTCACTGAAGCTGTGGCCATTGGAAGAACATTTGCTGCAATGAAAGACTATTCACTTGATGGTAACAGAGAAATGGTGGCACTTGGAACGATGAACCTTATTGGTTCATTGACATCTTGTTATGTTGCTACAGGATCTTTTTCGCGGTCGGCTGTGAACTATATGTCTGGTTGTAAAACTGCTGTATCAAACATAGTTATGTCCATCGTTTTGTTGTTAACTCTGCTACTAATTACACCGCTGTTCAAGTACACTCCAAATGCAGTGCTTGCCTCAATTATTATAGCTGCTGTGATGAGCCTGATAGACATTGAAGCAGTTATTCTTCTGTGGAAGATTGATAAATTTGATTTTCTAGCTTGCATGGGAGCCTTCTTTGGGGTCATTTTCAAAAGTGTTGAGATTGGCCTTCTAATTGCGGTGATAATATCTTTTGCTAAAATCCTTTTACAAGTGACAAGACCAAGGACTGCAGTACTTGGGAAGCTTCCAGGGACTACTGTATATAGGAACATCCTGCAATATCCTAAAGCAGCACAGATTCCTGGCATGCTTATCATTAGGGTTGATTCGGCAATCTACTTTTCAAATTCCAACTACATCAAGGACAGAATATTGAAGTGGTTGACTGATGAAGAGATTTATAGGACAGCAAGTGAATTTCCAAGTATACAATATCTCATTGTTGATATGTCACCTGTTACTGATATTGACACTAGTGGCATCCATGCCTTTGACGATTTACTTAAGAGCCTCAAGAAAAGAGATGTCCAGCTTCTTCTTGCAAATCCAGGACCGATTGTAACTGAGAAGCTCGAAGCATCAATGTTAACAAAAACAATCGGGGAAGATAAAATATTTCTAACAGTAGGAGATGCTGTTGAAACTTTTGGTCCAAAGGGTACAAATTTATGA 1977 0.3849 MSQVFSNDAVARAVEEIKSGPSSRRHADILAPHIHKVESPPKQTLFQEIKHSFNETFFSDDPFAKFQGQTKSRKFILGVQSVFPIFEWGQGYNLQKFKGDFIAGLTIASLCIPQDIAYAKLANLKPEYGLYTSFVAPLVYAFMGSSRDIAIGPVAVVSLLLGTLLTDEISDYTDPDYLRLAFTATFFAGITQMALGFLRLGFLIDFLSHAAIVGFMGGAAVTIALQQLKGLLGVKDFTKKTDIVSVMRSVWSAVHHGWNWETIVIGLAFLAFLLTTKYIAKKNKKLFWVSAISPMICVILSTLFVFLTRADKKGVAIVKHIKKGVNPSSVSEIILSGKYLSAGIRIGVVSGMVALTEAVAIGRTFAAMKDYSLDGNREMVALGTMNLIGSLTSCYVATGSFSRSAVNYMSGCKTAVSNIVMSIVLLLTLLLITPLFKYTPNAVLASIIIAAVMSLIDIEAVILLWKIDKFDFLACMGAFFGVIFKSVEIGLLIAVIISFAKILLQVTRPRTAVLGKLPGTTVYRNILQYPKAAQIPGMLIIRVDSAIYFSNSNYIKDRILKWLTDEEIYRTASEFPSIQYLIVDMSPVTDIDTSGIHAFDDLLKSLKKRDVQLLLANPGPIVTEKLEASMLTKTIGEDKIFLTVGDAVETFGPKGTNL 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00122 658 Pfam STAS domain 529 647 IPR002645 -
Car01g00122 658 Gene3D STAS domain 508 652 IPR036513 -
Car01g00122 658 SUPERFAMILY SpoIIaa-like 530 652 IPR036513 -
Car01g00122 658 Pfam Sulfate permease family 97 476 IPR011547 GO:0016021
Car01g00122 658 ProSiteProfiles STAS domain profile. 528 651 IPR002645 -
Car01g00122 658 PANTHER HIGH AFFINITY SULFATE TRANSPORTER 18 657 - -
Car01g00122 658 CDD STAS_SulP_like_sulfate_transporter 529 644 - -
Car01g00122 658 PANTHER SULFATE TRANSPORTER 18 657 IPR001902 GO:0015301|GO:0016020|GO:0055085
Car01g00122 658 ProSitePatterns SLC26A transporters signature. 126 147 IPR018045 GO:0008271|GO:0008272
Car01g00122 658 TIGRFAM sulP: sulfate permease 84 647 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00122 Car-Chr1 966296 972226 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00122 22 654 Inorganic Solute Cotransporters AT1G22150 71.767 0.0 912
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00122 K17470 - gmx:100784124 1046.96