Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00111 ATGACAAAGACAATTGTCATTCGTTATATCAACTTTATAGGTGTTTACTTCGTTAAAAGCAGCACAAAACTTCGTCTTTCAGATCCGGATCCACGCGCCGCCATCATGGTGAACGTTCCAAAGACGAAGAAGACATACTGCAAGAGCAAGGAGTGCAAGAAGCACACACTCCACAAAGTGACTCAATACAAGAAGGGTAAGGATAGCATCGCCGCTCAAGGTAAGCGTCGTTACGATCGCAAACAGTCCGGTTATGGTGGTCAGACTAAGCCCGTCTTCCACAAGAAGGCTAAAACCACTAAGAAAATTGTTCTGAGGCTGCAATGCCAAGGTTGCAAGCATGTTTCCCAACATGCTATCAAGTTATTGATGTATGTATTTCTGTTATGCAGAGGTGCAAGCACTTTGAGATTGGTGGTGACAAGAAGGGCAAGGGAACTTCTCTTTTCTAGATTTATATCATCTTCACTAGTCTGTCATCTCCACAATCTTCGCTGA 498 0.4357 MTKTIVIRYINFIGVYFVKSSTKLRLSDPDPRAAIMVNVPKTKKTYCKSKECKKHTLHKVTQYKKGKDSIAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHAIKLLMYVFLLCRGASTLRLVVTRRARELLFSRFISSSLVCHLHNLR 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00111 165 Pfam Ribosomal protein L44 54 121 IPR000552 GO:0003735|GO:0005840|GO:0006412
Car01g00111 165 ProSitePatterns Ribosomal protein L44e signature. 98 109 IPR000552 GO:0003735|GO:0005840|GO:0006412
Car01g00111 165 PANTHER 60S RIBOSOMAL PROTEIN L36A/L44 23 121 IPR000552 GO:0003735|GO:0005840|GO:0006412
Car01g00111 165 SUPERFAMILY Zn-binding ribosomal proteins 37 120 IPR011332 GO:0006412
Car01g00111 165 PANTHER 60S RIBOSOMAL PROTEIN L44-LIKE 23 121 - -
Car01g00111 165 MobiDBLite consensus disorder prediction 69 83 - -
Car01g00111 165 Gene3D - 36 128 - -
Car01g00111 165 MobiDBLite consensus disorder prediction 69 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00111 Car-Chr1 883036 885694 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00111 36 150 Cytoplasmic Ribosomal Protein Gene Family AT4G14320 71.304 4.50e-52 161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01354 06 13266164 13268683 Car01g00111 01 883036 885694 PCT