Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00109 ATGGTAGCCAGCAATGCAAGATTGACTAAGggatgtgatggttccattctgattgatgatggtccagatccagagaaaggtgcattttcacatcaaggggttagagggtttgatgtgatagaaagagccaaggcacaattggaagaatcttgtccaggagtggtttcttgtgctgacatagttgcattggcagcaagagatgcaattatcatgGCAAATGGACCAGCATACCAAGTTCCAACAGGGAGGAGAGATGGATTGGTCTCAAAGAAATCTCTAGCAGATGATATGCCAGATGTTAGTGATTCAATTCAGATACTCAAGGCCAAGTTTTTGAACAAGGGTCTCACAGAAAAAGACCTTGTCCTTCTCAGTGCTGCACATACAATTGGAACTACAGCATGCTTCTTTATGACAAAAAGACTATACAACTTTTTCCCAATTGGTGGAGGATCAGATCCAGCTATTAGTCCAAATTTCCTTCCAGAATTGAAAGCAAGGTGCCCTCAAGGTGGAGATGTTAATGTCAGATTAGCCATTGATGAAGGGAGTGATAAAAAATTTGACAAGCACATATTGCAAAACGTAAGGGAAGGTTTTGCTGTGTTAGAATCTGATGCAAGGCTTAATGATGATATAGTAACAAAGAGTGTAATTGATTCCTACTTTGGTCCACTTAATCCAATATTTGGACCTTCTTTTGAAGCTGATTTTGTTCAGTCTATTGTAAAAATGGGCCAAATTGGTGTCAAGACAGGTTCTAATGGAGCCATTAGACGTGTGTGCTCATCATTCAATTGA 801 0.3034 MVASNARLTKGCDGSILIDDGPDPEKGAFSHQGVRGFDVIERAKAQLEESCPGVVSCADIVALAARDAIIMANGPAYQVPTGRRDGLVSKKSLADDMPDVSDSIQILKAKFLNKGLTEKDLVLLSAAHTIGTTACFFMTKRLYNFFPIGGGSDPAISPNFLPELKARCPQGGDVNVRLAIDEGSDKKFDKHILQNVREGFAVLESDARLNDDIVTKSVIDSYFGPLNPIFGPSFEADFVQSIVKMGQIGVKTGSNGAIRRVCSSFN 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00109 266 CDD secretory_peroxidase 11 265 IPR033905 GO:0004601|GO:0042744
Car01g00109 266 Gene3D - 10 266 - -
Car01g00109 266 PRINTS Haem peroxidase superfamily signature 55 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car01g00109 266 PRINTS Haem peroxidase superfamily signature 73 85 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car01g00109 266 PRINTS Haem peroxidase superfamily signature 120 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car01g00109 266 PRINTS Haem peroxidase superfamily signature 181 196 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car01g00109 266 Pfam Peroxidase 8 222 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car01g00109 266 PANTHER PEROXIDASE 9 264 - -
Car01g00109 266 ProSitePatterns Peroxidases proximal heme-ligand signature. 120 130 IPR019793 -
Car01g00109 266 PANTHER PEROXIDASE 25-RELATED 9 264 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car01g00109 266 Gene3D Peroxidase, domain 2 98 245 - -
Car01g00109 266 PRINTS Plant peroxidase signature 35 48 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car01g00109 266 PRINTS Plant peroxidase signature 54 64 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car01g00109 266 PRINTS Plant peroxidase signature 73 88 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car01g00109 266 PRINTS Plant peroxidase signature 119 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car01g00109 266 PRINTS Plant peroxidase signature 179 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car01g00109 266 PRINTS Plant peroxidase signature 195 212 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car01g00109 266 PRINTS Plant peroxidase signature 240 253 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car01g00109 266 ProSiteProfiles Plant heme peroxidase family profile. 8 266 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car01g00109 266 SUPERFAMILY Heme-dependent peroxidases 9 266 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00109 Car-Chr1 875906 879294 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00109 8 266 Peroxidase AT1G77100 54.789 1.28e-89 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00109 K00430 - gmx:547549 431.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g00109 01 875906 879294 Car01g00109 01 875906 879294 ECH