Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00102 ATGGATCACGAAGCAGATGCAAACAGAACAGATTTGATGACAATAACTCGTTTTGTTTTGAACGAACAATCAAAGTATCCTGAATCACGTGGCGATTTCACAATCCTTCTCAGTCACATTCTTCTTGGATGCAAATTCGTTTGCTCTGCCGTTAACAAGGCAGGATTAGCAAACAACCTAGGACTTGCTGGAGACACCAATGTTCAAGGGGAGGAGCAAAAGAAATTGGATGTGATTTCTAATGAAGTATTTGTGAAGGCCTTAATCAGCAGTGGGCGCACATGTCTTCTTGTTTCTGAAGAGATTGAAGATGCTATCATTGTGCCACCAGCACTGCGTGGCAAGTACATTGTTGTGTTTGATCCTTTGGATGGGTCCTCAAACATTGATTGCGGTGTTTCTATAGGAACTATCTTTGGTATTTACACGGTGAAGGATACAGCTAACGTTGCCGTTGAGGCTGCATTGCAATCTGGTAGTAGTTTGGTAGCAGCTGGTTACTGTATGTATGGAAGCTCTTGCACGTTTGTGCTTAGCACAGGAAACGGAGTGAATGGCTTTACACTTGATCCTTCTCTTGGGGAGTTCATTTTGACTCATCCAAACATCAAGATACCAAAGAAAGGAAAACTTTATTCTGTGAATGAGGGAAATGCCAAAAACTGGGATGAACCAACCACCAAATATGTAGAAAATTGCAAGTTTCCAAAAGACGGTTCACCACCAAAGTCTCTAAGATACATTGGGAGTATGGTAGCTGATATCCATAGAACATTGCTATATGGTGGTATCTTCATGTACCCTGCTGATATGAAAAACCCAAATGGAAAACTAAGGTATGACTATGATCTACTTCTGTTCTCTTTATTTCTAACCATATTTTTTTAG 888 0.4054 MDHEADANRTDLMTITRFVLNEQSKYPESRGDFTILLSHILLGCKFVCSAVNKAGLANNLGLAGDTNVQGEEQKKLDVISNEVFVKALISSGRTCLLVSEEIEDAIIVPPALRGKYIVVFDPLDGSSNIDCGVSIGTIFGIYTVKDTANVAVEAALQSGSSLVAAGYCMYGSSCTFVLSTGNGVNGFTLDPSLGEFILTHPNIKIPKKGKLYSVNEGNAKNWDEPTTKYVENCKFPKDGSPPKSLRYIGSMVADIHRTLLYGGIFMYPADMKNPNGKLRYDYDLLLFSLFLTIFF 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00102 295 PIRSF FBPtase 9 290 IPR028343 GO:0042132
Car01g00102 295 Pfam Fructose-1-6-bisphosphatase, N-terminal domain 13 201 IPR033391 -
Car01g00102 295 SUPERFAMILY Carbohydrate phosphatase 9 285 - -
Car01g00102 295 Gene3D - 204 291 - -
Car01g00102 295 CDD FBPase 20 282 IPR000146 GO:0005975|GO:0016791
Car01g00102 295 PRINTS Fructose-1,6-bisphosphatase signature 155 178 IPR028343 GO:0042132
Car01g00102 295 PRINTS Fructose-1,6-bisphosphatase signature 186 209 IPR028343 GO:0042132
Car01g00102 295 PRINTS Fructose-1,6-bisphosphatase signature 38 65 IPR028343 GO:0042132
Car01g00102 295 PRINTS Fructose-1,6-bisphosphatase signature 212 239 IPR028343 GO:0042132
Car01g00102 295 PRINTS Fructose-1,6-bisphosphatase signature 75 101 IPR028343 GO:0042132
Car01g00102 295 PANTHER FRUCTOSE-1,6-BISPHOSPHATASE-RELATED 2 288 IPR000146 GO:0005975|GO:0016791
Car01g00102 295 Gene3D - 4 203 - -
Car01g00102 295 Pfam Fructose-1-6-bisphosphatase, C-terminal domain 205 285 IPR044015 -
Car01g00102 295 Hamap Fructose-1,6-bisphosphatase class 1 [fbp]. 13 293 IPR000146 GO:0005975|GO:0016791
Car01g00102 295 PANTHER FRUCTOSE-1,6-BISPHOSPHATASE, CYTOSOLIC-LIKE PROTEIN 2 288 - -
Car01g00102 295 PIRSF FBPtase_SBPase 9 290 IPR000146 GO:0005975|GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00102 Car-Chr1 836285 839824 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Car01g00102 FBPase 8.7e-76 CL0171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00102 K03841 - gmx:100797157 505.368