Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00100 ATGAGAGATATAAGGAAAGTAGTGAATGGATTGAAACCAGGCTTGATGATGGTATTGGTGCAGATTACATTTGCTTCTGTGCATGTTCTCTACAAATTTGCCATTAATAATGGAATGAGCGTAAGAGTTCTTACAGCGTACCGTCTCATTTTCGCAGCAGCTTGCACTATTCCCCTTGCTCTCATTTTTGAAAGGAAAAACAGACCAAAGCTGACTTGGAGGGTAGTTTTTATGTCATTCTTTTGTGGTCTTTTTGGGGGAAGTTTATTCCAAAACCTTTATTTTGAGTCATTGGCATTGGTATCAGCGACATTTGCTTCCGCCGTTTATAATCTAATTCCTGCCGTCACTTTTATCTTCGCCGTCTGTTGTGGTTACGAAAGATTGAATTTGCAAACGGCACCAGGGAAGGCTAAGGTGTTAGGAACAATAACAGGAATTGGTGGGGCTATGATGCTTACATTTCTGAAAGGTGTTGAAATTAACATTTGGAACTTCCACATTAAACTCTTACATAAGGACCAAAAGGGAACATTAAATCATGATTCTGTTACCAAATTGTTGGGTATTTTTTGTGGTCTCGGAAGTTGCTTCTGTTTTGCATTATGGCTCATCATTCAGACTAAGATGAGCAAAGAATACGAAGGTAATTATTCAAGTATAGCTATGATGTGTTTAATGGGTGCGATTCAAGCCACTGTTTTTGCCCTTTTTGTTGAGAAGGATTGGAGCCAATGGAGGTTGGGTTGGAATATTAGGCTTCTAACTGCAGCATATACGGGAATTGTGGGCTCTGGAATTATGTATATTGTAATTGCATGGTGTGTAGGGATGATAGGTCCACTGTACGCCTCTGTTTTCAACCCTCTGATGCTTGTGCTTGTGGTTATTGTTGGTTCCTTGATATTGGATGAGGAACTATACTTAGGAAGGTAA 936 0.3964 MRDIRKVVNGLKPGLMMVLVQITFASVHVLYKFAINNGMSVRVLTAYRLIFAAACTIPLALIFERKNRPKLTWRVVFMSFFCGLFGGSLFQNLYFESLALVSATFASAVYNLIPAVTFIFAVCCGYERLNLQTAPGKAKVLGTITGIGGAMMLTFLKGVEINIWNFHIKLLHKDQKGTLNHDSVTKLLGIFCGLGSCFCFALWLIIQTKMSKEYEGNYSSIAMMCLMGAIQATVFALFVEKDWSQWRLGWNIRLLTAAYTGIVGSGIMYIVIAWCVGMIGPLYASVFNPLMLVLVVIVGSLILDEELYLGR 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00100 311 Pfam EamA-like transporter family 188 309 IPR000620 GO:0016020|GO:0016021
Car01g00100 311 Pfam EamA-like transporter family 15 154 IPR000620 GO:0016020|GO:0016021
Car01g00100 311 PANTHER WAT1-RELATED PROTEIN 12 310 IPR030184 GO:0016021|GO:0022857
Car01g00100 311 SUPERFAMILY Multidrug resistance efflux transporter EmrE 233 309 - -
Car01g00100 311 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 154 - -
Car01g00100 311 PANTHER WAT1-RELATED PROTEIN 12 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00100 Car-Chr1 808431 811463 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00100 11 310 Nodulin-like Gene Family AT1G25270 40.000 3.44e-80 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00100 - - gmx:100809587 407.912
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01345 06 13135396 13138272 Car01g00100 01 808431 811463 PCT