Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00096 ATGATGAAGCAGAACGAAAGAACCAGTAGCAGCAATTGCGAAGTAAAACTCGAAACCCTAAACAGAGTACTCATAAAACCCTCCAAACCAACACCACCAAACCTTCAAACCTTCAAACTCTCTTTACTAGATCAACTTTCTCCCAATTTTCATGGCAACACCACTTTCTTCTACCCCAATTACAACAACATTAACCATTCTTCTCACTTCTTAGAAAAATCCAAACTTCTCCAAAACTCACTCTCTCAAACACTCACCCTTTTCTACCCTCTCGCCGGAAACCTCCAAGACGCCGCCACCATTAACTGCAACGACGGCGGCGTTTTCTTCATCGAATCTCAAACCAACACGACTCTCTCCGAAATTCTAACAAACCCCGATTTCGACACCTTCGAATGTTTCCTCCCAAGCACCGACGAAAAACAAATATTAAACCTCTTATTAATCCGATTCACCTTGTTCGATTGCGGTTCCACCGCAATTACCGTATCCCTCACACACAAGATCGCTGACTTCAATACTCTCATCACATTCCTCAAAACATGGACCGCCGTCTGCGGCGGAGACACCAAAATACTCCCTGATTTAACCACCGCCGTTAACCTATTTCCTCCGAGAGAATTTCCCGCCATTTCCGCATCAGTAAAAACTTCAAACAAAAAAATAACTTCTAGAAGATTCATTTTCGAAGCTTCGAAAATAGAAGAACTCAAAACAAGAGTGAAAAGAACAGTCGAATTCAACCCTACAAGAGTAGAAGTTGTTCTTGCACTCATTTGGAAATGTGCTCTTTCTACAACAGCTACGAAAACGACGTCGTTTTTTAAACATTCGATTCTGTTACAGGCAGTTAACCTCCGTACACGAATGGAGCCCACAATTCCGGAAAACGCGGTGGGGAACTTGATATGGCCGTTTTCAGTAACGGTTGAGGATGAATGCCACGTGGCAATAGATGAGATGGTGAAAAGGATGAGAAAGGGTATGAGGGAGTTTATAGAGAGCAAAGTAGAGAGGTTTAAAGAGGAAGGATGGTTTGAATTTGTGATGGAAAGTTTGAAAGAGAGGGTTAAGATTAACGAGGGTAGTTTGGTAATTTACAGGAGTTCGAGTTGGTGTAATTTTCCACTGCTTGAAAATGATTTTGGATGGGGGAAACCTGTGTGGAGTTGTAGTGTGAATAAAGTGGTGAGTAATACGATAGCTTTGATGGATACTAAAGATGGTTGTGGAGTTGAAGCTTTTGTCACTCTTGATGAGGATCACATGGAGTTCTTTCAACAAGATCAAGAGTTGTTAAACTATGCTATGCTCAACCCTAGAATCATCATTTGA 1335 0.4172 MMKQNERTSSSNCEVKLETLNRVLIKPSKPTPPNLQTFKLSLLDQLSPNFHGNTTFFYPNYNNINHSSHFLEKSKLLQNSLSQTLTLFYPLAGNLQDAATINCNDGGVFFIESQTNTTLSEILTNPDFDTFECFLPSTDEKQILNLLLIRFTLFDCGSTAITVSLTHKIADFNTLITFLKTWTAVCGGDTKILPDLTTAVNLFPPREFPAISASVKTSNKKITSRRFIFEASKIEELKTRVKRTVEFNPTRVEVVLALIWKCALSTTATKTTSFFKHSILLQAVNLRTRMEPTIPENAVGNLIWPFSVTVEDECHVAIDEMVKRMRKGMREFIESKVERFKEEGWFEFVMESLKERVKINEGSLVIYRSSSWCNFPLLENDFGWGKPVWSCSVNKVVSNTIALMDTKDGCGVEAFVTLDEDHMEFFQQDQELLNYAMLNPRIII 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00096 444 PANTHER F21J9.9 14 444 - -
Car01g00096 444 PANTHER VINORINE SYNTHASE-RELATED 14 444 - -
Car01g00096 444 Gene3D - 219 436 IPR023213 -
Car01g00096 444 Gene3D - 14 211 IPR023213 -
Car01g00096 444 Pfam Transferase family 16 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00096 Car-Chr1 752876 754328 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00096 15 428 Monolignol Biosynthesis Gene Families AT5G48930 22.101 1.57e-23 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00096 - - mtr:MTR_2g007880 632.098