Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00047 ATGTACCCATTTCTCTTCATCAATCAAAGATCAATGGGTAACATTTTGATTTTTATATTCTTCTCCATCATCGTCTCCTCTTATGGATACGATCCGTTGGATCCTTTTGGCAACATCACTGTCACATGGGATTTCTTGTCTGATAACGGAGAAACTGTCGATGTGAGGGTATCAATTTACAATTTCCAACTATTTCGCCATGTGGAAGAGCCAGGTTGGAAATTGAGTTGGGACTGGAGAGGTAATGAGGTGATTTGGGCAATGTTAGGAGCAGAGGCAATAGAACAAGGGAACTGCACTAGATTTAGAGGACAACAGAAACCACATTGTTGTAAAAAACATCCTGTTATTATTGATCTTATGCCTGGAACACCATACAACATGCAATCTGCTAATTGCTGTAAAGGAGGTGTCTTAACATCATTGACACAAAATCAGGCCAAACATGGTGCCTCCTTCCAAATGAATTATATGAAATCATCATTCTCAGTTTCAGGTAGCAGCAGCAATTTTAGTATGCCAGAAAATTTCACTTTAGGTATTCCTGGTTATAGTTGTGGAACACCATTTGAAGTCCCTCCTACCAAGTTTACCAAAGATGGATATAGATGGCAGCAAGTCTTAGAAACATGGAATGTGACATGTATTTACTCACAGTTTCTAGCATCACCTTCTCCAAAATGCTGTGTCTCATTGTCTGCATTCTATAACAGTACCATTGTTCCTTGCCCAGTTTGCAGCTGTAATTGCCAAGGACTACCAGGAGCACATTGTGTCAATTCTGATAAGACTTCAGTGTTACAAATGCCACAAGCAAATGAACCACCAAAACCAGTTATCAGGTGTTCACATCACATGTGCCCTATTCGTGTTCATTGGCATGTGAAACAAAGTTATAAAGAGTATTGGCGGGTCAAGATCACAATCACAAATCTAAACTTTGTCAAAAACTATTCTCAGTGGAATTTGGTTGTCTTGCACCCCAACTTGCGAAGCTTAACCCAAGTTTTCAGTTTCAACTACCAGGCCCTCCCAATTTATGGAAATCTCAATGATACAGGGATGTTTTGGGGGCTACCGTACTACAATGATTTGTTGCTAACACATGGGGAAAATGGGAATGTACAAACAGAGATACTACTACACAAAGATCAAGGAGAGTTTACCTTCAAAGAAGGATGGACTTTTCCTAGAAAAATATCATTCAATGGTGATGAATGTGTCATGCCATCTCCTGATGATTATCCAAGGCTTCCCAACACAGCTCATATTGCCACCAAAAGCTCTCTCATACTTTTGTACTCAATGTTACTATTTGCAATGTTGTTCTAA 1332 0.3949 MYPFLFINQRSMGNILIFIFFSIIVSSYGYDPLDPFGNITVTWDFLSDNGETVDVRVSIYNFQLFRHVEEPGWKLSWDWRGNEVIWAMLGAEAIEQGNCTRFRGQQKPHCCKKHPVIIDLMPGTPYNMQSANCCKGGVLTSLTQNQAKHGASFQMNYMKSSFSVSGSSSNFSMPENFTLGIPGYSCGTPFEVPPTKFTKDGYRWQQVLETWNVTCIYSQFLASPSPKCCVSLSAFYNSTIVPCPVCSCNCQGLPGAHCVNSDKTSVLQMPQANEPPKPVIRCSHHMCPIRVHWHVKQSYKEYWRVKITITNLNFVKNYSQWNLVVLHPNLRSLTQVFSFNYQALPIYGNLNDTGMFWGLPYYNDLLLTHGENGNVQTEILLHKDQGEFTFKEGWTFPRKISFNGDECVMPSPDDYPRLPNTAHIATKSSLILLYSMLLFAMLF 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00047 443 Pfam COBRA-like protein 55 218 IPR006918 GO:0010215|GO:0031225
Car01g00047 443 PIRSF COBRA 4 443 IPR006918 GO:0010215|GO:0031225
Car01g00047 443 PANTHER COBRA-LIKE PROTEIN 6 17 439 - -
Car01g00047 443 PANTHER PROTEIN COBRA 17 439 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00047 Car-Chr1 405576 409191 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00047 15 419 COBRA Gene Family AT1G09790 56.204 3.38e-164 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00047 - - lang:109329241 709.138