Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00044 ATGGAACTATCAGATTTGCAAAACAACAAGCAGAAGAGAGGCACCCACCAACAACAACAACAAGAATCATCTTCTTCTCCTTCAAattctcattctcattctcattctcattctcatCAACAACACCTTGTGGTCCCTTTTGATGGAAGACCACCCCCTTTCATTATGGGCTCCATCTCCATCCAACAACcttcttcaaactcttcttcttcttcttcctccaattcttcatcttctGCCATTGACGCTTCTCTCGCCATCGCCACCAGATCTGAACCTCCACTCCTCAATAACACAAATAACCAATTATCCTCCTCCTCTCCCGCCGTCACCACCGTCGCCAATCCTCCTAAACGATCCACCAAAGACAGACACACCAAAGTCGACGGCCGCGGCCGTAGAATTCGAATGCCGGCGACATGTGCTGCCAGGGTTTTTCAGTTGACCAGAGAATTAGGCCACAAATCCGACGGCGAAACAATCGAGTGGCTTCTCCAGCAAGCAGAACCAGCGATCATCGCCGCCACTGGCACCGGAACGATCCCAGCTAATTTCTCCACTCTGAACGTCTCACTCAGAAGCAGTGGCTCCACGCTGTCGGCTCCGCCGTCGAAATCGGCTCCTCACAGTTTTCACGGCGCGCTTGCACTGACTCGTCATCCTTACGAGGAAGCCGCGTACCAACACGCGCCTCTTCTAGGGTTTCATCAACACCACCAACAACTGATGAGTGCTGATCAAATCGGTGAAGCTTTAAATCCAAACGAGAATTACATGAGGAAACGTTATAGAGAAGATCTTTTCAAAGACGATAATAACAACAACGAAAGTGGTGGTGATGGTTCTTCTTCTTCTCCAAAAGCTTTCAAAACAAATCATCAACAACAAGATACTATGggtgaaggtgaaggtggaggcggcggcggcggtggtggtggtagtggAGcttcttcttcatcttcttctAATAGTTCAATTTCTGGACTTCTTCGACCGTCGAATATGATACCGGCGACAGCCATGTGGGCCACAGCGGGTAGTGGAAACACAATTTGGATGGTACCGGTGAGTGGCGGCGGTGGTGGTGCTGCAACTTCGAATTCAGAGACACAAACACAGAACATGTGGCCTTTTGGTCCTTCTCCATCTCAAAATAGTCAAACTCAAGGGAACAACGCCGGAACTCCGTCTCCGTTACATTTTATGCCGAGGTTTAATCTTCCGGTATCAggtggtggtggtggtggtggtgttgagtttcagggtggacgtggtggtTTACAATTGGGTTCAGTGTATCAACCTTCACAGCATATTGGATTGGCAGTTTCTGATTCAAATTTGGGTATGTTGGCTGCTCTTAATGCTTACACAAGAGCTGCAGCTGGTGCTACTGATTTCAATGTTAATGTTAATTCTGATAatcatcatcaccatcaccatcaacatcaacatcaacatcaTTCTATTTCATTGGATTCACAAtctcattctcattctcattctcattctcatcctcaACCTACTGAAAGTGAAGAAGATGCTCCTGATACCTCTCAATGA 1563 0.3909 MELSDLQNNKQKRGTHQQQQQESSSSPSNSHSHSHSHSHQQHLVVPFDGRPPPFIMGSISIQQPSSNSSSSSSSNSSSSAIDASLAIATRSEPPLLNNTNNQLSSSSPAVTTVANPPKRSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATGTGTIPANFSTLNVSLRSSGSTLSAPPSKSAPHSFHGALALTRHPYEEAAYQHAPLLGFHQHHQQLMSADQIGEALNPNENYMRKRYREDLFKDDNNNNESGGDGSSSSPKAFKTNHQQQDTMGEGEGGGGGGGGGGSGASSSSSSNSSISGLLRPSNMIPATAMWATAGSGNTIWMVPVSGGGGGAATSNSETQTQNMWPFGPSPSQNSQTQGNNAGTPSPLHFMPRFNLPVSGGGGGGGVEFQGGRGGLQLGSVYQPSQHIGLAVSDSNLGMLAALNAYTRAAAGATDFNVNVNSDNHHHHHHQHQHQHHSISLDSQSHSHSHSHSHPQPTESEEDAPDTSQ 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00044 520 MobiDBLite consensus disorder prediction 93 129 - -
Car01g00044 520 MobiDBLite consensus disorder prediction 93 117 - -
Car01g00044 520 MobiDBLite consensus disorder prediction 58 78 - -
Car01g00044 520 MobiDBLite consensus disorder prediction 1 78 - -
Car01g00044 520 MobiDBLite consensus disorder prediction 274 299 - -
Car01g00044 520 MobiDBLite consensus disorder prediction 487 512 - -
Car01g00044 520 Pfam TCP family transcription factor 120 244 IPR017887 -
Car01g00044 520 MobiDBLite consensus disorder prediction 313 328 - -
Car01g00044 520 MobiDBLite consensus disorder prediction 269 328 - -
Car01g00044 520 ProSiteProfiles TCP domain profile. 121 175 IPR017887 -
Car01g00044 520 PANTHER TRANSCRIPTION FACTOR TCP8 25 499 - -
Car01g00044 520 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 25 499 IPR005333 GO:0003700
Car01g00044 520 MobiDBLite consensus disorder prediction 470 520 - -
Car01g00044 520 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00044 Car-Chr1 388969 391289 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00044 118 447 TCP Transcription Factor Family AT1G35560 42.773 5.56e-60 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Car01g00044 TCP 3.5e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00044 - - adu:107482753 402.134